Literature DB >> 27929739

Timing of DNA lesion recognition: Ubiquitin signaling in the NER pathway.

Shalaka Chitale1,2, Holger Richly1.   

Abstract

Damaged DNA is repaired by specialized repair factors that are recruited in a well-orchestrated manner to the damage site. The DNA damage response at UV inflicted DNA lesions is accompanied by posttranslational modifications of DNA repair factors and the chromatin environment sourrounding the lesion. In particular, mono- and poly-ubiquitylation events are an integral part of the DNA damage signaling. Whereas ubiquitin signaling at DNA doublestrand breaks has been subject to intensive studies comparatively little is known about the intricacies of ubiquitylation events occurring during nucleotide excision repair (NER), the major pathway to remove bulky helix lesions. Both, the global genomic (GG-NER) and the transcription-coupled (TC-NER) branches of NER are subject to ubiquitylation and deubiquitylation processes.Here we summarize our current knowledge of the ubiquitylation network that drives DNA repair in the NER pathway and we discuss the crosstalk of ubiquitin signaling with other prominent post-translational modfications that might be essential to time the DNA damage recognition step.

Keywords:  DNA damage response; de-ubiquitylation; mono-ubiquitylation; nucleotide excision repair; poly-ubiquitylation; ubiquitin

Mesh:

Substances:

Year:  2016        PMID: 27929739      PMCID: PMC5283822          DOI: 10.1080/15384101.2016.1261227

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  94 in total

1.  Histone H3 and H4 ubiquitylation by the CUL4-DDB-ROC1 ubiquitin ligase facilitates cellular response to DNA damage.

Authors:  Hengbin Wang; Ling Zhai; Jun Xu; Heui-Yun Joo; Sarah Jackson; Hediye Erdjument-Bromage; Paul Tempst; Yue Xiong; Yi Zhang
Journal:  Mol Cell       Date:  2006-05-05       Impact factor: 17.970

Review 2.  Nucleotide excision repair in eukaryotes.

Authors:  Orlando D Schärer
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-10-01       Impact factor: 10.005

3.  Cullin 4A associates with the UV-damaged DNA-binding protein DDB.

Authors:  P Shiyanov; A Nag; P Raychaudhuri
Journal:  J Biol Chem       Date:  1999-12-10       Impact factor: 5.157

4.  DNA damage triggers nucleotide excision repair-dependent monoubiquitylation of histone H2A.

Authors:  Steven Bergink; Florian A Salomons; Deborah Hoogstraten; Tom A M Groothuis; Harm de Waard; Junxin Wu; Li Yuan; Elisabetta Citterio; Adriaan B Houtsmuller; Jacques Neefjes; Jan H J Hoeijmakers; Wim Vermeulen; Nico P Dantuma
Journal:  Genes Dev       Date:  2006-05-15       Impact factor: 11.361

5.  The deubiquitinating enzyme USP24 is a regulator of the UV damage response.

Authors:  Ling Zhang; Leah Nemzow; Hua Chen; Abigail Lubin; Xi Rong; Zhongyi Sun; Thomas K Harris; Feng Gong
Journal:  Cell Rep       Date:  2015-01-08       Impact factor: 9.423

Review 6.  Transcription-coupled nucleotide excision repair in mammalian cells: molecular mechanisms and biological effects.

Authors:  Maria Fousteri; Leon H F Mullenders
Journal:  Cell Res       Date:  2008-01       Impact factor: 25.617

7.  DDB2 promotes chromatin decondensation at UV-induced DNA damage.

Authors:  Martijn S Luijsterburg; Michael Lindh; Klara Acs; Mischa G Vrouwe; Alex Pines; Haico van Attikum; Leon H Mullenders; Nico P Dantuma
Journal:  J Cell Biol       Date:  2012-04-09       Impact factor: 10.539

8.  OTU deubiquitinases reveal mechanisms of linkage specificity and enable ubiquitin chain restriction analysis.

Authors:  Tycho E T Mevissen; Manuela K Hospenthal; Paul P Geurink; Paul R Elliott; Masato Akutsu; Nadia Arnaudo; Reggy Ekkebus; Yogesh Kulathu; Tobias Wauer; Farid El Oualid; Stefan M V Freund; Huib Ovaa; David Komander
Journal:  Cell       Date:  2013-07-03       Impact factor: 41.582

9.  Poly(ADP-ribose)-mediated interplay of XPA and PARP1 leads to reciprocal regulation of protein function.

Authors:  Jan M F Fischer; Oliver Popp; Daniel Gebhard; Sebastian Veith; Arthur Fischbach; Sascha Beneke; Alfred Leitenstorfer; Jörg Bergemann; Martin Scheffner; Elisa Ferrando-May; Aswin Mangerich; Alexander Bürkle
Journal:  FEBS J       Date:  2014-07-21       Impact factor: 5.542

10.  SUMO and ubiquitin-dependent XPC exchange drives nucleotide excision repair.

Authors:  Loes van Cuijk; Gijsbert J van Belle; Yasemin Turkyilmaz; Sara L Poulsen; Roel C Janssens; Arjan F Theil; Mariangela Sabatella; Hannes Lans; Niels Mailand; Adriaan B Houtsmuller; Wim Vermeulen; Jurgen A Marteijn
Journal:  Nat Commun       Date:  2015-07-07       Impact factor: 14.919

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  5 in total

1.  Mechanistic insights in transcription-coupled nucleotide excision repair of ribosomal DNA.

Authors:  Laurianne Daniel; Elena Cerutti; Lise-Marie Donnio; Julie Nonnekens; Christophe Carrat; Simona Zahova; Pierre-Olivier Mari; Giuseppina Giglia-Mari
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-02       Impact factor: 11.205

Review 2.  Role of deubiquitinases in DNA damage response.

Authors:  John Le; Eric Perez; Leah Nemzow; Feng Gong
Journal:  DNA Repair (Amst)       Date:  2019-02-21

Review 3.  Genetic determinants for chemo- and radiotherapy resistance in bladder cancer.

Authors:  Andrea Mari; David D'Andrea; Mohammad Abufaraj; Beat Foerster; Shoji Kimura; Shahrokh F Shariat
Journal:  Transl Androl Urol       Date:  2017-12

Review 4.  Regulation of DNA Repair Mechanisms: How the Chromatin Environment Regulates the DNA Damage Response.

Authors:  Jens Stadler; Holger Richly
Journal:  Int J Mol Sci       Date:  2017-08-05       Impact factor: 5.923

Review 5.  Emerging Roles of Non-proteolytic Ubiquitination in Tumorigenesis.

Authors:  Xiu Yin; Qingbin Liu; Fen Liu; Xinchen Tian; Tinghao Yan; Jie Han; Shulong Jiang
Journal:  Front Cell Dev Biol       Date:  2022-07-06
  5 in total

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