Literature DB >> 27929161

DNA ionogel: Structure and self-assembly.

Pankaj Kumar Pandey1, Kamla Rawat2, V K Aswal3, J Kohlbrecher4, H B Bohidar5.   

Abstract

DNA dissolved in ionic liquid (IL) solution (1-ethyl-3-methylimidazolium chloride, [C2mim][Cl]) showed a transition to the gel phase ([DNA] ≥ 1% (w/v)). The gelation time was 400 s for the 1% [IL] sample which reduced to 260 s for 5% [IL] concentration. Gelation times, obtained from the viscosity and ergodicity breaking from the dynamic structure factor data, were remarkably identical to each other. Correspondingly, the gelation temperature which was ∼60 °C increased to 67 °C with [IL] content. The small angle neutron scattering (SANS) structure factor profile revealed the presence of the following three distinct length scales: (a) mesh size, ξ ≈ 3 ± 0.5 nm for ionogels, and ≈0.73 ± 0.06 nm, for sol; (b) cross-sectional radius of DNA strand, Rc ≈ 1.6 ± 0.1 nm; and (c) the characteristic inter-cluster distance ≈33 ± 5 nm. Physical conformation of the DNA-IL complexes remained close to the Gaussian coil definition. It was observed that without IL, in the sol phase, the system was completely ergodic and did not gel, while on addition of IL a sudden transition to the non-ergodic (arrested) gel phase occurred. This was due to the formation of an amorphous network of DNA-IL complexes preceding gelation. In summary, it is shown that the DNA ionogels can be prepared with a tunable gel strength (27-70 Pa) and gelation temperature (60-67 °C). Further, the relaxation dynamics was found to be hierarchical in IL content of the gel, revealing considerable self-organization.

Entities:  

Year:  2016        PMID: 27929161     DOI: 10.1039/c6cp06229f

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  3 in total

1.  Harnessing the Noncovalent Interactions of DNA Backbone with 2D Silicate Nanodisks To Fabricate Injectable Therapeutic Hydrogels.

Authors:  Sayantani Basu; Settimio Pacelli; Yi Feng; Qinghua Lu; Jinxi Wang; Arghya Paul
Journal:  ACS Nano       Date:  2018-09-18       Impact factor: 15.881

Review 2.  The Role of Ionic Liquids in the Pharmaceutical Field: An Overview of Relevant Applications.

Authors:  Sónia N Pedro; Carmen S R Freire; Armando J D Silvestre; Mara G Freire
Journal:  Int J Mol Sci       Date:  2020-11-05       Impact factor: 5.923

3.  Associative behavior of polyimide/cyclohexanone solutions.

Authors:  Hongxiang Chen; Wei Liu; Mei Hong; Ensong Zhang; Xuemin Dai; Quan Chen; Wenke Yang; Yanhu Xue; Xuepeng Qiu; Xiangling Ji
Journal:  RSC Adv       Date:  2019-09-02       Impact factor: 4.036

  3 in total

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