Literature DB >> 27926854

Structural Characterization and Statistical-Mechanical Model of Epidermal Patterns.

Duyu Chen1, Wen Yih Aw2, Danelle Devenport2, Salvatore Torquato3.   

Abstract

In proliferating epithelia of mammalian skin, cells of irregular polygon-like shapes pack into complex, nearly flat two-dimensional structures that are pliable to deformations. In this work, we employ various sensitive correlation functions to quantitatively characterize structural features of evolving packings of epithelial cells across length scales in mouse skin. We find that the pair statistics in direct space (correlation function) and Fourier space (structure factor) of the cell centroids in the early stages of embryonic development show structural directional dependence (statistical anisotropy), which is a reflection of the fact that cells are stretched, which promotes uniaxial growth along the epithelial plane. In the late stages, the patterns tend toward statistically isotropic states, as cells attain global polarization and epidermal growth shifts to produce the skin's outer stratified layers. We construct a minimalist four-component statistical-mechanical model involving effective isotropic pair interactions consisting of hard-core repulsion and extra short-range soft-core repulsion beyond the hard core, whose length scale is roughly the same as the hard core. The model parameters are optimized to match the sample pair statistics in both direct and Fourier spaces. By doing this, the parameters are biologically constrained. In contrast with many vertex-based models, our statistical-mechanical model does not explicitly incorporate information about the cell shapes and interfacial energy between cells; nonetheless, our model predicts essentially the same polygonal shape distribution and size disparity of cells found in experiments, as measured by Voronoi statistics. Moreover, our simulated equilibrium liquid-like configurations are able to match other nontrivial unconstrained statistics, which is a testament to the power and novelty of the model. The array of structural descriptors that we deploy enable us to distinguish between normal, mechanically deformed, and pathological skin tissues. Our statistical-mechanical model enables one to generate tissue microstructure at will for further analysis. We also discuss ways in which our model might be extended to better understand morphogenesis (in particular the emergence of planar cell polarity), wound healing, and disease-progression processes in skin, and how it could be applied to the design of synthetic tissues. Copyright Â
© 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27926854      PMCID: PMC5153564          DOI: 10.1016/j.bpj.2016.10.036

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  83 in total

1.  Local density fluctuations, hyperuniformity, and order metrics.

Authors:  Salvatore Torquato; Frank H Stillinger
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-10-29

2.  Modeling epithelial cell behavior and organization.

Authors:  Satheesh Maheswaran; Paul M Speight; Peter Hammond
Journal:  IEEE Trans Nanobioscience       Date:  2007-03       Impact factor: 2.935

3.  Physical modeling of cell geometric order in an epithelial tissue.

Authors:  Sascha Hilgenfeldt; Sinem Erisken; Richard W Carthew
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-11       Impact factor: 11.205

4.  Hyperuniform long-range correlations are a signature of disordered jammed hard-particle packings.

Authors:  Chase E Zachary; Yang Jiao; Salvatore Torquato
Journal:  Phys Rev Lett       Date:  2011-04-29       Impact factor: 9.161

5.  Hyperuniformity, quasi-long-range correlations, and void-space constraints in maximally random jammed particle packings. I. Polydisperse spheres.

Authors:  Chase E Zachary; Yang Jiao; Salvatore Torquato
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-05-31

6.  Anomalous local coordination, density fluctuations, and void statistics in disordered hyperuniform many-particle ground states.

Authors:  Chase E Zachary; Salvatore Torquato
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-05-31

7.  Equilibrium phase behavior and maximally random jammed state of truncated tetrahedra.

Authors:  Duyu Chen; Yang Jiao; Salvatore Torquato
Journal:  J Phys Chem B       Date:  2014-04-09       Impact factor: 2.991

8.  Light scattering in the cornea.

Authors:  R W Hart; R A Farrell
Journal:  J Opt Soc Am       Date:  1969-06

9.  Maximally random jammed packings of Platonic solids: hyperuniform long-range correlations and isostaticity.

Authors:  Yang Jiao; Salvatore Torquato
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-10-31

10.  Artificial skin in perspective: concepts and applications.

Authors:  Carla A Brohem; Laura B da Silva Cardeal; Manoela Tiago; María S Soengas; Silvia B de Moraes Barros; Silvya S Maria-Engler
Journal:  Pigment Cell Melanoma Res       Date:  2010-11-09       Impact factor: 4.693

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  4 in total

1.  Self-Similar Dynamics of Nuclear Packing in the Early Drosophila Embryo.

Authors:  Sayantan Dutta; Nareg J-V Djabrayan; Salvatore Torquato; Stanislav Y Shvartsman; Matej Krajnc
Journal:  Biophys J       Date:  2019-07-16       Impact factor: 4.033

2.  Unjamming and collective migration in MCF10A breast cancer cell lines.

Authors:  Jae Hun Kim; Adrian F Pegoraro; Amit Das; Stephan A Koehler; Sylvia Ann Ujwary; Bo Lan; Jennifer A Mitchel; Lior Atia; Shijie He; Karin Wang; Dapeng Bi; Muhammad H Zaman; Jin-Ah Park; James P Butler; Kyu Ha Lee; Jacqueline R Starr; Jeffrey J Fredberg
Journal:  Biochem Biophys Res Commun       Date:  2019-11-04       Impact factor: 3.575

3.  On the origins of order.

Authors:  Jeffrey J Fredberg
Journal:  Soft Matter       Date:  2022-03-23       Impact factor: 3.679

4.  Mechanical Model of Nuclei Ordering in Drosophila Embryos Reveals Dilution of Stochastic Forces.

Authors:  Franz Kaiser; Zhiyi Lv; Daniel Marques Rodrigues; Jan Rosenbaum; Timo Aspelmeier; Jörg Großhans; Karen Alim
Journal:  Biophys J       Date:  2018-04-10       Impact factor: 4.033

  4 in total

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