Literature DB >> 27925327

X-ray Crystal Structure of a Metalled Double-Helix Generated by Infinite and Consecutive C*-AgI -C* (C*:N1 -Hexylcytosine) Base Pairs through Argentophilic and Hydrogen Bond Interactions.

Angel Terrón1, Blas Moreno-Vachiano1, Antonio Bauzá1, Angel García-Raso1, Juan Jesús Fiol1, Miquel Barceló-Oliver1, Elies Molins2, Antonio Frontera1.   

Abstract

The synthesis of a metalled double-helix containing exclusively silver-mediated C*-C* base pairs is reported herein (C*=N1 hexylcytosine). Remarkably, it is the first crystal structure containing infinite and consecutive C*-AgI -C* base pairs that form a double helix. The AgI ion occupies the center between two C* residues with N(3)-Ag bond lengths of 2.1 Å and short AgI -AgI distances (3.1 Å) suggesting an interesting argentophilic attraction as a stabilization source of the helical disposition. The solid-state structure is further stabilized by metal-mediated base-pairs, hydrogen bonding and π-stacking interactions. Moreover, the angle N(3)-Ag-N(3) is almost linear in the [Ag(N1 hexylcytosine)2 ]+ motif and the bases are not coplanar, thus generating a double-strand helical aggregate in the solid state. The noncovalent and argentophilic interactions have been rationalized based on DFT calculations.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  X-ray crystallography; density functional calculations; helical structures; silver; solid-state structures

Year:  2017        PMID: 27925327     DOI: 10.1002/chem.201604331

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  5 in total

1.  Atomic Structure of a Fluorescent Ag8 Cluster Templated by a Multistranded DNA Scaffold.

Authors:  Dustin J E Huard; Aida Demissie; Dahye Kim; David Lewis; Robert M Dickson; Jeffrey T Petty; Raquel L Lieberman
Journal:  J Am Chem Soc       Date:  2019-01-02       Impact factor: 15.419

Review 2.  Metal-mediated base pairs in parallel-stranded DNA.

Authors:  Jens Müller
Journal:  Beilstein J Org Chem       Date:  2017-12-13       Impact factor: 2.883

3.  Silver-Mediated Double Helix: Structural Parameters for a Robust DNA Building Block.

Authors:  Xi Chen; Alexander Karpenko; Olga Lopez-Acevedo
Journal:  ACS Omega       Date:  2017-10-27

4.  Addressing the properties of "Metallo-DNA" with a Ag(i)-mediated supramolecular duplex.

Authors:  Liam Mistry; Osama El-Zubir; Gema Dura; William Clegg; Paul G Waddell; Thomas Pope; Werner A Hofer; Nick G Wright; Benjamin R Horrocks; Andrew Houlton
Journal:  Chem Sci       Date:  2019-02-08       Impact factor: 9.825

5.  "Metal-modified base pairs" vs. "metal-mediated pairs of bases": not just a semantic issue!

Authors:  Bernhard Lippert
Journal:  J Biol Inorg Chem       Date:  2022-01-29       Impact factor: 3.358

  5 in total

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