Literature DB >> 27922826

Phenotypic spandrel: absolute discrimination and ligand antagonism.

Paul François, Mathieu Hemery, Kyle A Johnson, Laura N Saunders.   

Abstract

We consider the general problem of sensitive and specific discrimination between biochemical species. An important instance is immune discrimination between self and not-self, where it is also observed experimentally that ligands just below the discrimination threshold negatively impact response, a phenomenon called antagonism. We characterize mathematically the generic properties of such discrimination, first relating it to biochemical adaptation. Then, based on basic biochemical rules, we establish that, surprisingly, antagonism is a generic consequence of any strictly specific discrimination made independently from ligand concentration. Thus antagonism constitutes a 'phenotypic spandrel': a phenotype existing as a necessary by-product of another phenotype. We exhibit a simple analytic model of discrimination displaying antagonism, where antagonism strength is linear in distance from the detection threshold. This contrasts with traditional proofreading based models where antagonism vanishes far from threshold and thus displays an inverted hierarchy of antagonism compared to simpler models. The phenotypic spandrel studied here is expected to structure many decision pathways such as immune detection mediated by TCRs and FCϵRIs, as well as endocrine signalling/disruption.

Mesh:

Substances:

Year:  2016        PMID: 27922826     DOI: 10.1088/1478-3975/13/6/066011

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  4 in total

1.  Untangling the Hairball: Fitness-Based Asymptotic Reduction of Biological Networks.

Authors:  Félix Proulx-Giraldeau; Thomas J Rademaker; Paul François
Journal:  Biophys J       Date:  2017-10-17       Impact factor: 4.033

2.  Multiple steady states and the form of response functions to antigen in a model for the initiation of T-cell activation.

Authors:  Alan D Rendall; Eduardo D Sontag
Journal:  R Soc Open Sci       Date:  2017-11-08       Impact factor: 2.963

3.  Identifying feasible operating regimes for early T-cell recognition: The speed, energy, accuracy trade-off in kinetic proofreading and adaptive sorting.

Authors:  Wenping Cui; Pankaj Mehta
Journal:  PLoS One       Date:  2018-08-16       Impact factor: 3.240

4.  The PLOS Biology XV Collection: 15 Years of Exceptional Science Highlighted across 12 Months.

Authors:  Lauren A Richardson; Sandra L Schmid; Avinash Bhandoola; Christelle Harly; Anders Hedenström; Michael T Laub; Georgina M Mace; Piali Sengupta; Ann M Stock; Andrew F Read; Harmit S Malik; Mark Estelle; Sally Lowell; Jonathan Kimmelman
Journal:  PLoS Biol       Date:  2019-02-27       Impact factor: 8.029

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.