Literature DB >> 27920917

Redetermination of metarossite, CaV5+2O6·2H2O.

Anaïs Kobsch1, Robert T Downs2, Kenneth J Domanik3.   

Abstract

The crystal structure of metarossite, ideally CaV2O6·2H2O [chemical name: calcium divanadium(V) hexa-oxide dihydrate], was first determined using precession photographs, with fixed isotropic displacement parameters and without locating the positions of the H atoms, leading to a reliability factor R = 0.11 [Kelsey & Barnes (1960 ▸). Can. Mineral.6, 448-466]. This communication reports a structure redetermination of this mineral on the basis of single-crystal X-ray diffraction data of a natural sample from the Blue Cap mine, San Juan County, Utah, USA (R1 = 0.036). Our study not only confirms the structural topology reported in the previous study, but also makes possible the refinement of all non-H atoms with anisotropic displacement parameters and all H atoms located. The metarossite structure is characterized by chains of edge-sharing [CaO8] polyhedra parallel to [100] that are themselves connected by chains of alternating [VO5] trigonal bipyramids parallel to [010]. The two H2O mol-ecules are bonded to Ca. Analysis of the displacement parameters show that the [VO5] chains librate around [010]. In addition, we measured the Raman spectrum of metarossite and compared it with IR and Raman data previously reported. Moreover, heating of metarossite led to a loss of water, which results in a transformation to the brannerite-type structure, CaV2O6, implying a possible dehydration pathway for the compounds M2+V2O6·xH2O, with M = Cu, Cd, Mg or Mn, and x = 2 or 4.

Entities:  

Keywords:  brannerite; crystal structure; hydrogen bonds; metarossite; phase transformation; redetermination

Year:  2016        PMID: 27920917      PMCID: PMC5120707          DOI: 10.1107/S2056989016012433

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Mineralogical and crystal-chemical context

Metarossite was originally described from Bull Pen Canyon, San Miguel County, Colorado, by Foshag & Hess (1927 ▸) as a yellow, platy, soft and friable mineral with composition CaV2O6·2H2O. It is soluble in hot water and generally is formed as a dehydration product of rossite, CaV2O6·4H2O, which itself crystallizes from aqueous solutions (Ahmed & Barnes, 1963 ▸). Barnes & Qurashi (1952 ▸) reported triclinic symmetry (P ) and unit-cell parameters [a = 6.215 (5), b = 7.065 (5), c = 7.769 (5) Å, α = 92.97 (17), β = 96.65 (17), γ = 105.78 (17)°] of metarossite from a sample from an area near Thompson’s, Utah. Later, by means of precession photographs, Kelsey & Barnes (1960 ▸) determined its crystal structure from the material used by Barnes & Qurashi (1952 ▸). For structure refinement (R = 0.11), fixed isotropic displacement parameters were introduced without locating the positions of the hydrogen atoms. This study reports the refinement of the structure of a metarossite sample (Fig. 1 ▸) from the Blue Cap mine, San Juan County, Utah, USA, with anisotropic displacement parameters for all non-hydrogen atoms, positions of hydrogen atoms determined, and improvement of the reliability factor to 0.036. Raman spectra were also recorded and compared with that reported in the two studies by Frost et al. (2004 ▸, 2005 ▸), on a sample from the Burro mine, San Miguel County of Colorado, USA.
Figure 1

Photograph of the metarossite specimen analyzed in this study.

Structural commentary

The structural topology of metarossite for all non-hydrogen atoms from this study is identical to that reported by Kelsey & Barnes (1960 ▸). Chains of edge-sharing distorted [VO5] trigonal bipyramids run parallel to [010], with [V1O5] and [V2O5] polyhedra alternating along the chains (Fig. 2 ▸ a). These chains are linked by chains of edge-sharing [CaO8] polyhedra aligned parallel to [100] (Fig. 2 ▸ b). The water mol­ecules are located at three vertices of the [CaO8] polyhedra [OW3, OW8i and OW8ii; symmetry codes: (i) −x + 1, −y + 1, −z; (ii) x + 1, y, z].
Figure 2

Crystal structure of metarossite, showing (a) the chains of alternating [V1O5] and [V2O5] trigonal bipyramids (yellow and green, respectively) along [010], and (b) the chains of edge-sharing distorted [CaO8] square anti­prisms (magenta) along [100]. H atoms are represented by blue spheres; hydrogen bonding is indicated by dashed lines.

It is inter­esting to note that there is a radial orientation of the displacement ellipsoids associated with the [VO5] chains when viewed along the chain direction (Fig. 3 ▸). The amplitude also slightly radially increases, as indicated by the black dashed circles in Fig. 3 ▸. We inter­pret this as the oscillation or libration of the [VO5] chains around [010]. A similar behavior was reported for brackebuschite Pb2Mn3+(VO4)2(OH) (Lafuente & Downs, 2016 ▸) where the [Mn3+(VO4)2OH] chains oscillating about an axis.
Figure 3

A view down [010] of the [VO5] chain composed of alternated [V1O5] (yellow) and [V2O5] (green) polyhedra. The red ellipsoids represent the displacement parameters of the O atoms at the 99.999% probability level. The black circles demonstrate that the entire [VO5] chain oscillate or librate around [010], with a slight radial increase of amplitudes.

Numerical data of the hydrogen-bonding scheme in metarossite are presented in Table 1 ▸. The bond-valence calculations (Brown, 2002 ▸) with the parameters given by Brese & O’Keeffe (1991 ▸) confirm that OW3 and OW8 correspond to the two H2O mol­ecules (Table 2 ▸). The low bond-valence sum for O5 is because it is an acceptor for three hydrogen atoms (H2, H3 and H4; Table 1 ▸). In fact, all acceptor O atoms involved in hydrogen bonding are from VO5 polyhedra, providing the additional linkage between the [CaO8] and [VO5] chains.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
OW3—H1⋯O4i 0.78 (5)2.37 (5)2.965 (4)133 (4)
OW3—H2⋯O5ii 0.72 (4)2.25 (5)2.900 (3)150 (5)
OW8—H3⋯O5iii 0.75 (4)2.09 (5)2.810 (3)162 (5)
OW8—H4⋯O5iv 0.84 (4)1.97 (5)2.794 (3)166 (4)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

Table 2

Bond-valence sums for metarossite

 O1O2OW3*O4O5O6O7OW8* ΣM
Ca 0.2530.2180.315 0.2720.2400.205 2.107
       0.3260.278 
V10.5810.687  1.4911.624   5.153
 0.770        
V20.8250.780 1.584  1.415  5.083
  0.479       
ΣO 2.176 2.200 0.218 1.899 1.491 1.897 1.981 0.482  

Note: (*) H atoms not considered for calculation.

Raman spectrum

The Raman spectrum of metarossite (Fig. 4 ▸) is comparable with the data recorded by Frost et al. (2005 ▸) below 1000 cm−1, but is different in the O–H stretching region between 2800 and 3700 cm−1 (Frost et al., 2004 ▸). Indeed, they recorded only three Raman bands (at 3177, 3401 and 3473 cm−1), whereas with the present data, it is possible to distinguish four to five bands depending on the orientation (2904, 2954, 3189, 3240 and 3398 cm−1), along with a broad shoulder around 3415–3480 cm−1 (Fig. 4 ▸). According to Libowitzky (1999 ▸), the band at 3398 cm−1 can be attributed to the OW8–H4 vibration, and the broad shoulder around 3415–3480 cm−1 may correspond to the OW8–H3 and OW3–H2 vibrations (Table 3 ▸). The last vibration (OW3–H1) cannot be seen on Fig. 4 ▸, but since the frequency currently accepted for free OH− ion is 3560 cm−1 (Lutz, 1995 ▸), it can be associated with the IR band at 3526 cm−1 observed by Frost et al. (2004 ▸).
Figure 4

Raman spectrum of metarossite collected with a 532 nm laser. Only the band at 3400 cm−1 can be clearly assigned to hydrogen stretching vibrations (OW8–H4) but the broad shoulder discernible around 3415–3480 cm−1 corresponds probably to OW8–H3 and OW3–H2 vibrations.

Table 3

O⋯O measured distances (Å), Raman stretching frequencies (cm−1) calculated using the correlation for d < 3.2 Å and samples without Cu (Libowitzky, 1999 ▸), and comparison with O⋯O calculated by Frost et al. (2004 ▸) from IR frequencies (cm−1).

 This study Frost et al. (2004) 
O—H⋯OO⋯OννO⋯O
OW3—H1⋯O42.965350435262.9393
OW3—H2⋯O52.900348233872.7995
OW8—H3⋯O52.810342131812.6977
OW8—H4⋯O52.794340428672.6227

Synthesis and crystallization

The natural sample used in this study is from the Blue Cap mine, San Juan County of Utah, USA (Fig. 1 ▸) and belongs to the RRUFF project collection (http://rruff.info/R100065). Chemical analysis was performed with a CAMECA SX100 electron microprobe operated at 20 kV and 20 nA and a beam size <1 µm. Eight analysis points yielded an average composition (wt.%): CaO 19.2 (1), V2O5 66.6 (4), trace amount of Sr, and H2O 13.06 estimated to provide two H2O mol­ecules per formula unit. The empirical chemical formula, based on eight oxygen atoms, is Ca0.94V5+ 2.02O6·2H2O. The Raman spectrum of metarossite was collected from a randomly oriented crystal at 50% power of 150 mW on a Thermo–Almega microRaman system, using a solid-state laser with a wavelength of 532 nm and a thermoelectrically cooled CCD detector. The laser was partially polarized with 4 cm−1 resolution and a spot size of 1 µm.

Transformation of metarossite

When a small piece of metarossite (edge length in all dimensions 0.1 mm) was placed under a full power laser (150 mW, 532 nm), a change in its Raman spectrum was observed (Fig. 5 ▸). In particular, all bands originating from O–H stretching vibrations disappeared, suggesting a complete dehydration of the sample. Moreover, the spectrum below 1200 cm−1 was found to match that of synthetic CaV2O6 (Baran et al., 1987 ▸). In addition, we observed similar Raman spectra collected from a metarossite fragment that was heated in air in an oven at 373 K for 12 h. Single crystal X-ray diffraction analysis on the heated crystal revealed monoclinic symmetry with unit cell parameters a = 10.0 (1), b = 3.6 (2), c = 6.9 (6) Å, β = 105 (6)°, which match those reported for brannerite (Szymanski & Scott, 1982 ▸). However, we were unable to obtain more detailed structure information for the heated sample due to its poor crystallinity (caused probably by dehydration).
Figure 5

Raman spectrum of metarossite after heated by a full power 532 nm laser (red curve) and comparison with an initial metarossite spectrum (black curve).

A number of synthetic metavanadates, such as those with formula M 2+V2O6 where M = Cu, Cd, Mg or Mn, are found to be isostructural with brannerite (Baran et al., 1987 ▸; Müller-Buschbaum & Kobel, 1991 ▸). There are also many hydrated forms of these compounds, including synthetic CuV2O6·2H2O (Leblanc & Ferey, 1990 ▸), and CdV2O6·2H2O (Ulická, 1988 ▸), as well as natural dickthomssenite MgV2O6·7H2O (Hughes et al., 2001 ▸) or ansermetite MnV2O6·4H2O (Brugger et al., 2003 ▸). Because tetra­hydrated or dihydrated forms of these materials have structures related to rossite or metarossite, it is likely, then, that natural equivalents of the synthetic metavanadates M 2+V2O6·xH2O (M = Cu, Cd, Mg or Mn and x = 0, 2 or 4) may exist.

Refinement details

Crystal data, data collection and structure refinement details are summarized in Table 4 ▸. The electron microprobe analysis revealed traces of Sr in our sample. The empirical formula shows a little deficiency for Ca and excess for V. For simplicity, the ideal chemical formula CaV2O6·2H2O was assumed during the refinement. Kelsey & Barnes (1960 ▸) underline that {101} is often a twin-plane in metarossite, but the crystal used for this X-ray analysis did not show twinning. Atomic coordinates of the previous study were taken as starting parameters for refinement. The H atoms were located from difference Fourier syntheses and their positions refined with fixed isotropic displacement parameters (U iso = 0.04 Å2). The maximum residual electron density in the difference Fourier maps was located at 0.86 Å from O7 and the minimum density at 1.39 Å from Ca.
Table 4

Experimental details

Crystal data
Chemical formulaCaV2O6·2H2O
M r 273.99
Crystal system, space groupTriclinic, P
Temperature (K)293
a, b, c (Å)6.2059 (4), 7.0635 (4), 7.7516 (5)
α, β, γ (°)93.166 (4), 96.548 (4), 105.883 (4)
V3)323.36 (4)
Z 2
Radiation typeMo Kα
μ (mm−1)3.68
Crystal size (mm)0.07 × 0.07 × 0.06
 
Data collection
DiffractometerBruker APEXII CCD area-detector
Absorption correctionMulti-scan (SADABS; Bruker, 2004)
T min, T max 0.669, 0.746
No. of measured, independent and observed [I > 2σ(I)] reflections5576, 2075, 1508
R int 0.037
(sin θ/λ)max−1)0.735
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.036, 0.076, 1.01
No. of reflections2075
No. of parameters113
H-atom treatmentOnly H-atom coordinates refined
Δρmax, Δρmin (e Å−3)0.77, −0.58

Computer programs: APEX2 and SAINT (Bruker, 2004 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2014 (Sheldrick, 2015b ▸), XtalDraw (Downs & Hall-Wallace, 2003 ▸) and publCIF (Westrip, 2010 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989016012433/wm5311sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016012433/wm5311Isup2.hkl CCDC reference: 1497229 Additional supporting information: crystallographic information; 3D view; checkCIF report
CaV2O6·2H2OZ = 2
Mr = 273.99F(000) = 268
Triclinic, P1Dx = 2.814 Mg m3
a = 6.2059 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 7.0635 (4) ÅCell parameters from 1255 reflections
c = 7.7516 (5) Åθ = 2.7–29.8°
α = 93.166 (4)°µ = 3.68 mm1
β = 96.548 (4)°T = 293 K
γ = 105.883 (4)°Platy, pale yellow
V = 323.36 (4) Å30.07 × 0.07 × 0.06 mm
Bruker APEXII CCD area-detector diffractometer1508 reflections with I > 2σ(I)
φ and ω scanRint = 0.037
Absorption correction: multi-scan (SADABS; Bruker, 2004)θmax = 31.5°, θmin = 2.7°
Tmin = 0.669, Tmax = 0.746h = −9→8
5576 measured reflectionsk = −10→10
2075 independent reflectionsl = −11→11
Refinement on F2Hydrogen site location: difference Fourier map
Least-squares matrix: fullOnly H-atom coordinates refined
R[F2 > 2σ(F2)] = 0.036w = 1/[σ2(Fo2) + (0.0318P)2 + 0.0696P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.076(Δ/σ)max < 0.001
S = 1.01Δρmax = 0.77 e Å3
2075 reflectionsΔρmin = −0.58 e Å3
113 parametersExtinction correction: SHELXL2014 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.005 (2)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Ca0.76199 (10)0.46286 (9)0.14933 (8)0.01285 (14)
V10.44824 (9)0.10219 (7)0.33438 (6)0.01068 (13)
V20.37329 (8)0.58264 (7)0.34629 (6)0.01004 (13)
O10.4051 (4)0.8480 (3)0.4170 (3)0.0137 (4)
O20.5250 (3)0.3869 (3)0.3867 (3)0.0106 (4)
OW30.8519 (5)0.7632 (4)0.3671 (4)0.0236 (6)
O40.1030 (3)0.4726 (3)0.3330 (3)0.0157 (5)
O50.1896 (4)0.0684 (3)0.2322 (3)0.0207 (5)
O60.6214 (4)0.1115 (3)0.1910 (3)0.0232 (5)
O70.4308 (4)0.5998 (3)0.1408 (3)0.0155 (5)
OW80.0045 (4)0.7225 (3)0.0059 (3)0.0164 (5)
H10.937 (8)0.747 (6)0.444 (6)0.040*
H20.900 (8)0.856 (7)0.332 (6)0.040*
H30.078 (8)0.808 (7)0.066 (6)0.040*
H4−0.069 (7)0.766 (6)−0.073 (6)0.040*
U11U22U33U12U13U23
Ca0.0120 (3)0.0142 (3)0.0116 (3)0.0024 (2)0.0017 (2)0.0017 (2)
V10.0140 (3)0.0077 (2)0.0094 (2)0.00209 (19)0.00032 (18)0.00023 (18)
V20.0124 (2)0.0082 (2)0.0087 (2)0.0026 (2)−0.00078 (18)−0.00002 (18)
O10.0216 (11)0.0084 (10)0.0098 (10)0.0030 (9)−0.0002 (8)0.0005 (8)
O20.0116 (10)0.0092 (10)0.0109 (10)0.0032 (8)−0.0001 (8)0.0002 (8)
OW30.0237 (13)0.0201 (13)0.0243 (14)0.0026 (11)0.0011 (10)0.0030 (11)
O40.0131 (10)0.0160 (11)0.0162 (11)0.0021 (9)−0.0006 (8)0.0013 (9)
O50.0211 (12)0.0136 (11)0.0232 (13)0.0024 (9)−0.0075 (9)0.0003 (9)
O60.0347 (14)0.0147 (11)0.0204 (12)0.0027 (11)0.0151 (10)0.0004 (9)
O70.0188 (11)0.0170 (11)0.0113 (10)0.0064 (9)0.0007 (8)0.0020 (9)
OW80.0196 (13)0.0132 (12)0.0130 (11)0.0005 (10)−0.0014 (9)0.0006 (9)
Ca—O7i2.381 (2)V1—O1iii1.899 (2)
Ca—O4ii2.394 (2)V1—O21.943 (2)
Ca—OW8ii2.441 (2)V1—O1iv2.004 (2)
Ca—O62.448 (2)V1—V1v3.1033 (10)
Ca—O22.476 (2)V1—V2iv3.1187 (7)
Ca—O72.496 (2)V2—O41.633 (2)
Ca—OW32.530 (3)V2—O71.675 (2)
Ca—OW8i2.554 (2)V2—O11.874 (2)
V1—O61.623 (2)V2—O21.895 (2)
V1—O51.655 (2)V2—O2iv2.075 (2)
O7i—Ca—O4ii145.60 (8)O6—Ca—OW8i71.80 (7)
O7i—Ca—OW8ii79.03 (8)O2—Ca—OW8i133.65 (7)
O4ii—Ca—OW8ii84.88 (8)O7—Ca—OW8i149.58 (7)
O7i—Ca—O689.84 (8)OW3—Ca—OW8i135.12 (8)
O4ii—Ca—O688.49 (8)O6—V1—O5109.11 (13)
OW8ii—Ca—O6148.85 (8)O6—V1—O1iii105.21 (11)
O7i—Ca—O2116.63 (7)O5—V1—O1iii97.89 (11)
O4ii—Ca—O293.49 (7)O6—V1—O294.99 (10)
OW8ii—Ca—O2145.90 (8)O5—V1—O297.89 (10)
O6—Ca—O264.79 (7)O1iii—V1—O2148.57 (9)
O7i—Ca—O772.07 (8)O6—V1—O1iv114.83 (11)
O4ii—Ca—O7140.72 (7)O5—V1—O1iv135.88 (11)
OW8ii—Ca—O797.51 (8)O1iii—V1—O1iv74.72 (9)
O6—Ca—O7106.65 (8)O2—V1—O1iv75.01 (8)
O2—Ca—O763.17 (7)O4—V2—O7106.24 (11)
O7i—Ca—OW3131.12 (9)O4—V2—O1105.17 (10)
O4ii—Ca—OW372.51 (9)O7—V2—O1100.84 (10)
OW8ii—Ca—OW376.53 (8)O4—V2—O2106.81 (10)
O6—Ca—OW3129.97 (8)O7—V2—O293.48 (10)
O2—Ca—OW370.58 (8)O1—V2—O2139.47 (9)
O7—Ca—OW370.05 (8)O4—V2—O2iv102.14 (10)
O7i—Ca—OW8i77.53 (7)O7—V2—O2iv151.38 (10)
O4ii—Ca—OW8i69.34 (7)O1—V2—O2iv74.79 (8)
OW8ii—Ca—OW8i77.39 (8)O2—V2—O2iv74.69 (9)
D—H···AD—HH···AD···AD—H···A
OW3—H1···O4iv0.78 (5)2.37 (5)2.965 (4)133 (4)
OW3—H2···O5vi0.72 (4)2.25 (5)2.900 (3)150 (5)
OW8—H3···O5vii0.75 (4)2.09 (5)2.810 (3)162 (5)
OW8—H4···O5viii0.84 (4)1.97 (5)2.794 (3)166 (4)
  4 in total

1.  Raman and infrared spectroscopy of selected vanadates.

Authors:  Ray L Frost; Kristy L Erickson; Matt L Weier; Onuma Carmody
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2005-03       Impact factor: 4.098

2.  Hydrogen bonding in selected vanadates: a Raman and infrared spectroscopy study.

Authors:  Ray L Frost; Kristy L Erickson; Matt L Weier
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2004-08       Impact factor: 4.098

3.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

4.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

  4 in total

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