Literature DB >> 27913149

Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health.

Harry C Jubb1, Arun P Pandurangan2, Meghan A Turner3, Bernardo Ochoa-Montaño2, Tom L Blundell4, David B Ascher5.   

Abstract

Many essential biological processes including cell regulation and signalling are mediated through the assembly of protein complexes. Changes to protein-protein interaction (PPI) interfaces can affect the formation of multiprotein complexes, and consequently lead to disruptions in interconnected networks of PPIs within and between cells, further leading to phenotypic changes as functional interactions are created or disrupted. Mutations altering PPIs have been linked to the development of genetic diseases including cancer and rare Mendelian diseases, and to the development of drug resistance. The importance of these protein mutations has led to the development of many resources for understanding and predicting their effects. We propose that a better understanding of how these mutations affect the structure, function, and formation of multiprotein complexes provides novel opportunities for tackling them, including the development of small-molecule drugs targeted specifically to mutated PPIs.
Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  Drug development; Mutations; Protein interaction; Protein stability; Protein-protein interfaces

Mesh:

Substances:

Year:  2016        PMID: 27913149     DOI: 10.1016/j.pbiomolbio.2016.10.002

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  36 in total

1.  Flex ddG: Rosetta Ensemble-Based Estimation of Changes in Protein-Protein Binding Affinity upon Mutation.

Authors:  Kyle A Barlow; Shane Ó Conchúir; Samuel Thompson; Pooja Suresh; James E Lucas; Markus Heinonen; Tanja Kortemme
Journal:  J Phys Chem B       Date:  2018-02-15       Impact factor: 2.991

2.  mCSM-PPI2: predicting the effects of mutations on protein-protein interactions.

Authors:  Carlos H M Rodrigues; Yoochan Myung; Douglas E V Pires; David B Ascher
Journal:  Nucleic Acids Res       Date:  2019-07-02       Impact factor: 16.971

3.  Prediction of impacts of mutations on protein structure and interactions: SDM, a statistical approach, and mCSM, using machine learning.

Authors:  Arun Prasad Pandurangan; Tom L Blundell
Journal:  Protein Sci       Date:  2019-11-25       Impact factor: 6.725

4.  A photo-cross-linking approach to monitor folding and assembly of newly synthesized proteins in a living cell.

Authors:  Ryoji Miyazaki; Naomi Myougo; Hiroyuki Mori; Yoshinori Akiyama
Journal:  J Biol Chem       Date:  2017-11-20       Impact factor: 5.157

5.  The R882H substitution in the human de novo DNA methyltransferase DNMT3A disrupts allosteric regulation by the tumor supressor p53.

Authors:  Jonathan E Sandoval; Norbert O Reich
Journal:  J Biol Chem       Date:  2019-10-22       Impact factor: 5.157

6.  Analysis of human mitochondrial genome co-occurrence networks of Asian population at varying altitudes.

Authors:  Rahul K Verma; Alena Kalyakulina; Cristina Giuliani; Pramod Shinde; Ajay Deep Kachhvah; Mikhail Ivanchenko; Sarika Jalan
Journal:  Sci Rep       Date:  2021-01-08       Impact factor: 4.379

7.  Melting of Hemoglobin in Native Solutions as measured by IMS-MS.

Authors:  Daniel W Woodall; Christopher J Brown; Shannon A Raab; Tarick J El-Baba; Arthur Laganowsky; David H Russell; David E Clemmer
Journal:  Anal Chem       Date:  2020-02-07       Impact factor: 6.986

8.  Methods for Discovering and Targeting Druggable Protein-Protein Interfaces and Their Application to Repurposing.

Authors:  E Sila Ozdemir; Farideh Halakou; Ruth Nussinov; Attila Gursoy; Ozlem Keskin
Journal:  Methods Mol Biol       Date:  2019

9.  Oligomeric interactions maintain active-site structure in a noncooperative enzyme family.

Authors:  Yaohui Li; Rongzhen Zhang; Chi Wang; Farhad Forouhar; Oliver B Clarke; Sergey Vorobiev; Shikha Singh; Gaetano T Montelione; Thomas Szyperski; Yan Xu; John F Hunt
Journal:  EMBO J       Date:  2022-07-08       Impact factor: 14.012

Review 10.  Implications of disease-related mutations at protein-protein interfaces.

Authors:  Dapeng Xiong; Dongjin Lee; Le Li; Qiuye Zhao; Haiyuan Yu
Journal:  Curr Opin Struct Biol       Date:  2021-12-24       Impact factor: 6.809

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