Literature DB >> 27909867

Developmental validation of the HomyGene19+14Y System.

Weian Du1, Ling Chen1, Hong Liu2, Pingming Qiu1, Fayuan Li3, Jing Gao4, Yu Zhou4, Bangchao Wang4, Chao Liu5,6.   

Abstract

The HomyGene19+14Y System (HG19+14Y) is a PCR-based amplification kit that enables typing of 18 autosomal short tandem repeat (STR) loci (i.e., CSF1PO, D2S1338, D3S1358, D5S818, D6S1043, D7S820, D8S1179, D12S391, D13S317, D16S539, D18S51, D19S433, D21S11, FGA, Penta E, TPOX, TH01, vWA), 14 widely used Y chromosome STR (Y-STR) loci (Y_GATA_H4, DYS385a/b, DYS389I/II, DYS390, DYS391, DYS392, DYS393, DYS438, DYS439, DYS456, DYS458, DYS635), and amelogenin. This multiplex system was designed for the simultaneous analysis of amelogenin-Y allele mutation, single-source searches, kinship (including familial searching), mixture profiles, international data sharing, and other forensic applications. In this study, the multiplex system was validated for sensitivity, specificity, DNA mixtures, stability, precision, stutter, reproducibility, parallel tests, PCR-based conditions, and population analysis according to the Scientific Working Group on DNA Analysis Methods (SWGDAM) developmental validation guidelines. A total of 212 alleles were detected for the 18 autosomal STR loci among 528 Guangdong Han individuals, and 431 haplotypes were found for 14 Y-STRs among 452 unrelated males. The combined match probability (CMP) of the HG19+14Y System was calculated as 2.39 × 10-29. All the validation results showed that the HG19+14Y System would be a robust, reliable, highly polymorphic, and informative forensic kit.

Entities:  

Keywords:  DNA typing; Forensic science; Multiplex PCR; STR; Short tandem repeat; Validation

Mesh:

Substances:

Year:  2016        PMID: 27909867     DOI: 10.1007/s00414-016-1505-2

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  27 in total

1.  A brief history of the formation of DNA databases in forensic science within Europe.

Authors:  P D Martin; H Schmitter; P M Schneider
Journal:  Forensic Sci Int       Date:  2001-06-15       Impact factor: 2.395

Review 2.  Biology and Genetics of New Autosomal STR Loci Useful for Forensic DNA Analysis.

Authors:  J M Butler; C R Hill
Journal:  Forensic Sci Rev       Date:  2012-01

3.  Developmental validation of the PowerPlex(®) Fusion 6C System.

Authors:  Martin G Ensenberger; Kristy A Lenz; Learden K Matthies; Gregory M Hadinoto; John E Schienman; Angela J Przech; Michael W Morganti; Daniel T Renstrom; Victoria M Baker; Kori M Gawrys; Marlijn Hoogendoorn; Carolyn R Steffen; Pablo Martín; Antonio Alonso; Hope R Olson; Cynthia J Sprecher; Douglas R Storts
Journal:  Forensic Sci Int Genet       Date:  2015-12-22       Impact factor: 4.882

Review 4.  Scientific standards for studies in forensic genetics.

Authors:  Peter M Schneider
Journal:  Forensic Sci Int       Date:  2006-07-27       Impact factor: 2.395

5.  Deletion of amelogenin Y-locus in forensics: literature revision and description of a novel method for sex confirmation.

Authors:  P Tozzo; A Giuliodori; S Corato; E Ponzano; D Rodriguez; L Caenazzo
Journal:  J Forensic Leg Med       Date:  2013-04-12       Impact factor: 1.614

6.  Development of new PCR multiplex system by the simultaneous detection of 10 miniSTRs, SE33, Penta E, Penta D, and four Y-STRs.

Authors:  Muhammad Shafique; Muhammad Saqib Shahzad; Ziaur Rahman; Muhammad Adnan Shan; Rukhsana Perveen; Muhammad Shahzad; Manzoor Hussain; Ahmad Ali Shahid; Tayyab Husnain
Journal:  Int J Legal Med       Date:  2016-05-11       Impact factor: 2.686

7.  Comparisons of familial DNA database searching strategies.

Authors:  Jianye Ge; Ranajit Chakraborty; Arthur Eisenberg; Bruce Budowle
Journal:  J Forensic Sci       Date:  2011-08-09       Impact factor: 1.832

8.  Developmental validation of the PowerPlex® Y23 System: a single multiplex Y-STR analysis system for casework and database samples.

Authors:  Jonelle M Thompson; Margaret M Ewing; William E Frank; Jill J Pogemiller; Craig A Nolde; D Jody Koehler; Alyssandra M Shaffer; Dawn R Rabbach; Patricia M Fulmer; Cynthia J Sprecher; Douglas R Storts
Journal:  Forensic Sci Int Genet       Date:  2013-01-20       Impact factor: 4.882

9.  Population data and mutation rates of 19 STR loci in seven provinces from China based on Goldeneye™ DNA ID System 20A.

Authors:  Qiu-Ling Liu; Ye-Fei Chen; Xiao-Ling Huang; Kai-Yan Liu; Hu Zhao; De-Jian Lu
Journal:  Int J Legal Med       Date:  2016-09-13       Impact factor: 2.686

10.  Choosing relatives for DNA identification of missing persons.

Authors:  Jianye Ge; Bruce Budowle; Ranajit Chakraborty
Journal:  J Forensic Sci       Date:  2010-12-13       Impact factor: 1.832

View more
  1 in total

1.  Validation of a multiplex amplification system of 19 autosomal STRs and 27 Y-STRs.

Authors:  Feng Liu; Fei Jia; Fang Sun; Bin Zhao; Hongying Shen
Journal:  Forensic Sci Res       Date:  2019-11-05
  1 in total

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