Literature DB >> 27908398

Big Data Bioinformatics.

Xue-Wen Chen, Jean X Gao.   

Abstract

Entities:  

Mesh：

Year:  2016        PMID： 27908398      PMCID： PMC5219000          DOI： 10.1016/j.ymeth.2016.11.017

Source DB:  PubMed          Journal:  Methods        ISSN： 1046-2023            Impact factor:   3.608


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  19 in total

Review 1.  Bioinformatics.

Authors:  Jason H Moore
Journal:  J Cell Physiol       Date:  2007-11       Impact factor: 6.384

2.  Histone modification levels are predictive for gene expression.

Authors:  Rosa Karlić; Ho-Ryun Chung; Julia Lasserre; Kristian Vlahovicek; Martin Vingron
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-01       Impact factor: 11.205

3.  ChIP-Seq of transcription factors predicts absolute and differential gene expression in embryonic stem cells.

Authors:  Zhengqing Ouyang; Qing Zhou; Wing Hung Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-07       Impact factor: 11.205

4.  In vivo enhancer analysis of human conserved non-coding sequences.

Authors:  Len A Pennacchio; Nadav Ahituv; Alan M Moses; Shyam Prabhakar; Marcelo A Nobrega; Malak Shoukry; Simon Minovitsky; Inna Dubchak; Amy Holt; Keith D Lewis; Ingrid Plajzer-Frick; Jennifer Akiyama; Sarah De Val; Veena Afzal; Brian L Black; Olivier Couronne; Michael B Eisen; Axel Visel; Edward M Rubin
Journal:  Nature       Date:  2006-11-05       Impact factor: 49.962

5.  Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors.

Authors:  Kevin Y Yip; Chao Cheng; Nitin Bhardwaj; James B Brown; Jing Leng; Anshul Kundaje; Joel Rozowsky; Ewan Birney; Peter Bickel; Michael Snyder; Mark Gerstein
Journal:  Genome Biol       Date:  2012-09-26       Impact factor: 13.583

6.  Integrated genomic analyses of ovarian carcinoma.

Authors: 
Journal:  Nature       Date:  2011-06-29       Impact factor: 49.962

7.  PILGRM: an interactive data-driven discovery platform for expert biologists.

Authors:  Casey S Greene; Olga G Troyanskaya
Journal:  Nucleic Acids Res       Date:  2011-06-07       Impact factor: 16.971

8.  Modeling the relative relationship of transcription factor binding and histone modifications to gene expression levels in mouse embryonic stem cells.

Authors:  Chao Cheng; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2011-09-16       Impact factor: 16.971

9.  Defining cell-type specificity at the transcriptional level in human disease.

Authors:  Wenjun Ju; Casey S Greene; Felix Eichinger; Viji Nair; Jeffrey B Hodgin; Markus Bitzer; Young-Suk Lee; Qian Zhu; Masami Kehata; Min Li; Song Jiang; Maria Pia Rastaldi; Clemens D Cohen; Olga G Troyanskaya; Matthias Kretzler
Journal:  Genome Res       Date:  2013-08-15       Impact factor: 9.043

10.  An integrated encyclopedia of DNA elements in the human genome.

Authors: 
Journal:  Nature       Date:  2012-09-06       Impact factor: 49.962
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  3 in total

1.  Texture analysis based on PI-RADS 4/5-scored magnetic resonance images combined with machine learning to distinguish benign lesions from prostate cancer.

Authors:  Lu Ma; Qi Zhou; Huming Yin; Xiaojie Ang; Yu Li; Gansheng Xie; Gang Li
Journal:  Transl Cancer Res       Date:  2022-05       Impact factor: 0.496

Review 2.  Application of Artificial Intelligence Technology in Oncology: Towards the Establishment of Precision Medicine.

Authors:  Ryuji Hamamoto; Kruthi Suvarna; Masayoshi Yamada; Kazuma Kobayashi; Norio Shinkai; Mototaka Miyake; Masamichi Takahashi; Shunichi Jinnai; Ryo Shimoyama; Akira Sakai; Ken Takasawa; Amina Bolatkan; Kanto Shozu; Ai Dozen; Hidenori Machino; Satoshi Takahashi; Ken Asada; Masaaki Komatsu; Jun Sese; Syuzo Kaneko
Journal:  Cancers (Basel)       Date:  2020-11-26       Impact factor: 6.639

3.  Autophagy-Related Genes in Atherosclerosis.

Authors:  Yuankun Chen; Ao Zeng; Shumiao He; Siqing He; Chunmei Li; Wenjie Mei; Qun Lu
Journal:  J Healthc Eng       Date:  2021-07-02       Impact factor: 2.682
  3 in total

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