Literature DB >> 27902285

Raineyella antarctica gen. nov., sp. nov., a psychrotolerant, d-amino-acid-utilizing anaerobe isolated from two geographic locations of the Southern Hemisphere.

Elena Vladimirovna Pikuta1, Rodolfo Javier Menes2, Alisa Michelle Bruce3, Zhe Lyu4, Nisha B Patel5, Yuchen Liu6, Richard Brice Hoover1, Hans-Jürgen Busse7, Paul Alexander Lawson5, William Barney Whitman4.   

Abstract

A Gram-stain-positive bacterium, strain LZ-22T, was isolated from a rhizosphere of moss Leptobryum sp. collected at the shore of Lake Zub in Antarctica. Cells were motile, straight or pleomorphic rods with sizes of 0.6-1.0×3.5-10 µm. The novel isolate was a facultatively anaerobic, catalase-positive, psychrotolerant mesophile. Growth was observed at 3-41 °C (optimum 24-28 °C), with 0-7 % (w/v) NaCl (optimum 0.25 %) and at pH 4.0-9.0 (optimum pH 7.8). The quinone system of strain LZ-22T possessed predominately menaquinone MK-9(H4). The genomic G+C content was 70.2 mol%. Strain 10J was isolated from a biofilm of sediment microbial fuel cell, in Uruguay and had 99 % 16S rRNA gene sequence similarity to strain LZ-22T. DNA-DNA-hybridization values of 84 % confirmed that both strains belonged to the same species. Both strains grew on sugars, proteinaceous compounds, and some amino- and organic acids. Strain LZ-22T uniquely grew on D-enantiomers of histidine and valine while neglecting growth on L-enantiomers. Both strains were sensitive to most of the tested antibiotics but resistant to tested nitrofurans and sulfanilamides. Phylogenetic analyses of the 16S rRNA gene sequences indicated that the strains were related to members of the family Propionibacteriaceae (~93-94 % 16S rRNA gene sequence similarity) with formation of a separate branch within the radiation of the genera Granulicoccus and Luteococcus. Based on phenotypic and genotypic characteristics, we propose the affiliation of both strains into a novel species of a new genus. The name Raineyella antarctica gen. nov., sp. nov. is proposed for the novel taxon with the type strain LZ-22T (=ATCC TSD-18T=DSM 100494T=JCM 30886T).

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Year:  2016        PMID: 27902285     DOI: 10.1099/ijsem.0.001552

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria.

Authors:  Sangita Ganesh; Anthony D Bertagnolli; Laura A Bristow; Cory C Padilla; Nigel Blackwood; Montserrat Aldunate; Annie Bourbonnais; Mark A Altabet; Rex R Malmstrom; Tanja Woyke; Osvaldo Ulloa; Konstantinos T Konstantinidis; Bo Thamdrup; Frank J Stewart
Journal:  ISME J       Date:  2018-07-10       Impact factor: 10.302

Review 2.  New Insights Into the Mechanisms and Biological Roles of D-Amino Acids in Complex Eco-Systems.

Authors:  Alena Aliashkevich; Laura Alvarez; Felipe Cava
Journal:  Front Microbiol       Date:  2018-04-06       Impact factor: 5.640

Review 3.  Current Status and Potential Applications of Underexplored Prokaryotes.

Authors:  Kian Mau Goh; Saleha Shahar; Kok-Gan Chan; Chun Shiong Chong; Syazwani Itri Amran; Mohd Helmi Sani; Iffah Izzati Zakaria; Ummirul Mukminin Kahar
Journal:  Microorganisms       Date:  2019-10-18

4.  Performance and Microbial Community Analysis of an Electrobiofilm Reactor Enhanced by Ferrous-EDTA.

Authors:  Nan Liu; Ying-Ying Li; Du-Juan Ouyang; Chang-Yong Zou; Wei Li; Ji-Hong Zhao; Ji-Xiang Li; Wen-Juan Wang; Ja-Jun Hu
Journal:  ACS Omega       Date:  2021-07-06

5.  Biohydrogen Production by Antarctic Psychrotolerant Klebsiella sp. ABZ11.

Authors:  Abdullahi Mohammed; Mohd Firdaus Abdul-Wahab; Mazlan Hashim; Abdul Hafidz Omar; Mohd Nadzri Md Reba; Mohd Farid Muhamad Said; Kamaruzaman Soeed; Siti Aisyah Alias; Jerzy Smykla; Mustapha Abba; Zaharah Ibrahim
Journal:  Pol J Microbiol       Date:  2018
  5 in total

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