Literature DB >> 27900031

Chromosome 16q genes CDH1, CDH13 and ADAMTS18 are correlated and frequently methylated in human lymphoma.

Lobna Alkebsi1, Hiroshi Handa2, Akihiko Yokohama3, Takayuki Saitoh4, Norifumi Tsukamoto4, Hirokazu Murakami1.   

Abstract

The products of the E-cadherin (CDH1), H-cadherin (CDH13) and a disintegrin and metalloproteinase with thrombospondin motif 18 (ADAMTS18) genes are proteins displaying structural features and functions on the cell surface membrane, and have been reported to be involved in cancer progression. Using reverse transcription-quantitative polymerase chain reaction (RT-qPCR) and methylation-specific PCR (MSP) analysis, the promoter methylation status and messenger RNA (mRNA) expression levels of CDH1, CDH13 and ADAMTS18, which are putative tumor-suppressor genes located on chromosome 16q, were evaluated. In addition, the mRNA expression levels of DNA methyltransferases (DNMTs) 1, 3A and 3B were examined, and the correlations among the different parameters analyzed were studied in 36 lymphomas and 16 non-malignant lymphoid tissue samples. A significant positive correlation was identified between the expression levels of CDH1 and CDH13 (r=0.735, P<0.01). ADAMTS18 expression also exhibited a significant positive correlation with both CDH1 and CDH13 mRNA expression levels (r=0.625, P<0.01; and r=0.720, P<0.01, respectively). Our results indicated that CDH1, CDH13 and ADAMTS18, which are localized on chromosome 16q, are remarkably correlated and frequently methylated in human lymphomas, and their methylation could not be explained solely by the mRNA expression level of DNMTs.

Entities:  

Keywords:  ADAMTS18; CDH1; CDH13; human lymphoma

Year:  2016        PMID: 27900031      PMCID: PMC5103978          DOI: 10.3892/ol.2016.5116

Source DB:  PubMed          Journal:  Oncol Lett        ISSN: 1792-1074            Impact factor:   2.967


  39 in total

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2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

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Authors:  D H Jeong; M Y Youm; Y N Kim; K B Lee; M S Sung; H K Yoon; K T Kim
Journal:  Int J Gynecol Cancer       Date:  2006 May-Jun       Impact factor: 3.437

4.  Frequent down-regulation of E-cadherin by genetic and epigenetic changes in the malignant progression of hepatocellular carcinomas.

Authors:  T Matsumura; R Makino; K Mitamura
Journal:  Clin Cancer Res       Date:  2001-03       Impact factor: 12.531

5.  Hypermethylation-modulated down-regulation of CDH1 expression contributes to the progression of esophageal cancer.

Authors:  Zhi-Qiang Ling; Pei Li; Ming-Hua Ge; Xuan Zhao; Fu-Jun Hu; Xian-Hua Fang; Zi-Min Dong; Wei-Min Mao
Journal:  Int J Mol Med       Date:  2011-03-03       Impact factor: 4.101

6.  CpG island hypermethylation in human colorectal tumors is not associated with DNA methyltransferase overexpression.

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Review 7.  The fundamental role of epigenetic events in cancer.

Authors:  Peter A Jones; Stephen B Baylin
Journal:  Nat Rev Genet       Date:  2002-06       Impact factor: 53.242

8.  The expression of DNA methyltransferases and methyl-CpG-binding proteins is not associated with the methylation status of p14(ARF), p16(INK4a) and RASSF1A in human lung cancer cell lines.

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Journal:  Oncogene       Date:  2002-07-18       Impact factor: 9.867

9.  Aberrant methylation of E-cadherin and H-cadherin genes in nonsmall cell lung cancer and its relation to clinicopathologic features.

Authors:  Dong Sun Kim; Mi Jin Kim; Ji Yun Lee; Young Zoo Kim; Eun Jin Kim; Jae Yong Park
Journal:  Cancer       Date:  2007-12-15       Impact factor: 6.860

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  2 in total

1.  CINdex: A Bioconductor Package for Analysis of Chromosome Instability in DNA Copy Number Data.

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Journal:  Cancer Inform       Date:  2017-12-13

2.  Adamts18 deficiency promotes colon carcinogenesis by enhancing β-catenin and p38MAPK/ERK1/2 signaling in the mouse model of AOM/DSS-induced colitis-associated colorectal cancer.

Authors:  Tiantian Lu; Suying Dang; Rui Zhu; Ying Wang; Zongying Nie; Tao Hong; Wei Zhang
Journal:  Oncotarget       Date:  2017-03-21
  2 in total

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