Literature DB >> 27900008

Discovery of genes from feces correlated with colorectal cancer progression.

Chia-Long Lee1, Chi-Jung Huang2, Shung-Haur Yang3, Chun-Chao Chang4, Chi-Cheng Huang5, Chih-Cheng Chien6, Ruey-Neng Yang7.   

Abstract

Colorectal cancer (CRC) is considered to develop slowly via a progressive accumulation of genetic mutations. Markers of CRC may serve to provide the basis for decision-making, and may assist in cancer prevention, detection and prognostic prediction. DNA and messenger (m)RNA molecules that are present in human feces faithfully represent CRC manifestations. In the present study, exogenous mouse cells verified the feasibility of total fecal RNA as a marker of CRC. Furthermore, five significant genes encoding solute carrier family 15, member 4 (SLC15A4), cluster of differentiation (CD)44, 3-oxoacid CoA-transferase 1 (OXCT1), placenta-specific 8 (PLAC8) and growth arrest-specific 2 (GAS2), which are differentially expressed in the feces of CRC patients, were verified in different CRC cell lines using quantitative polymerase chain reaction. The present study demonstrated that the mRNA level of SLC15A4 was increased in the majority of CRC cell lines evaluated (SW1116, LS123, Caco-2 and T84). An increased level of CD44 mRNA was only detected in an early-stage CRC cell line, SW1116, whereas OXCT1 was expressed at higher levels in the metastatic CRC cell line CC-M3. In addition, two genes, PLAC8 and GAS2, were highly expressed in the recurrent CRC cell line SW620. Genes identified in the feces of CRC patients differed according to their clinical characteristics, and this differential expression was also detected in the corresponding CRC cell lines. In conclusion, feces represent a good marker of CRC and can be interpreted through the appropriate CRC cell lines.

Entities:  

Keywords:  3-oxoacid CoA-transferase 1; cluster of differentiation 44; colorectal cancer; fecal RNA; growth arrest-specific 2; member 4; placenta-specific 8; serine/threonine kinase 17b; solute carrier family 15

Year:  2016        PMID: 27900008      PMCID: PMC5103954          DOI: 10.3892/ol.2016.5069

Source DB:  PubMed          Journal:  Oncol Lett        ISSN: 1792-1074            Impact factor:   2.967


  68 in total

1.  The AMP-activated protein kinase prevents ceramide synthesis de novo and apoptosis in astrocytes.

Authors:  C Blázquez; M J Geelen; G Velasco; M Guzmán
Journal:  FEBS Lett       Date:  2001-02-02       Impact factor: 4.124

Review 2.  p27(kip1) functional regulation in human cancer: a potential target for therapeutic designs.

Authors:  B Belletti; M S Nicoloso; M Schiappacassi; E Chimienti; S Berton; F Lovat; A Colombatti; G Baldassarre
Journal:  Curr Med Chem       Date:  2005       Impact factor: 4.530

3.  Reciprocal interactions between tumor-associated macrophages and CD44-positive cancer cells via osteopontin/CD44 promote tumorigenicity in colorectal cancer.

Authors:  Guanhua Rao; Hongyi Wang; Baowei Li; Li Huang; Danfeng Xue; Xiaohui Wang; Haijing Jin; Jun Wang; Yushan Zhu; Youyong Lu; Lei Du; Quan Chen
Journal:  Clin Cancer Res       Date:  2012-12-18       Impact factor: 12.531

4.  Growth-inhibitory effects of the ketone body, monoacetoacetin, on human gastric cancer cells with succinyl-CoA: 3-oxoacid CoA-transferase (SCOT) deficiency.

Authors:  Masamitsu Sawai; Masakazu Yashiro; Yukio Nishiguchi; Masaichi Ohira; Kosei Hirakawa
Journal:  Anticancer Res       Date:  2004 Jul-Aug       Impact factor: 2.480

5.  Adjuvant Chemotherapy for Stage II Colon Cancer: The Role of Molecular Markers in Choosing Therapy.

Authors:  Patrick Chun; Zev A Wainberg
Journal:  Gastrointest Cancer Res       Date:  2009-09

6.  CD44 interacts with EGFR and promotes head and neck squamous cell carcinoma initiation and progression.

Authors:  Aymee Perez; David M Neskey; Judy Wen; Lutecia Pereira; Erika P Reategui; W Jarrard Goodwin; Kermit L Carraway; Elizabeth J Franzmann
Journal:  Oral Oncol       Date:  2012-12-20       Impact factor: 5.337

7.  Multitarget stool DNA testing for colorectal-cancer screening.

Authors:  Thomas F Imperiale; David F Ransohoff; Steven H Itzkowitz; Theodore R Levin; Philip Lavin; Graham P Lidgard; David A Ahlquist; Barry M Berger
Journal:  N Engl J Med       Date:  2014-03-19       Impact factor: 91.245

8.  Ribosomal protein S27-like in colorectal cancer: a candidate for predicting prognoses.

Authors:  Chi-Jung Huang; Shung-Haur Yang; Chia-Long Lee; Yu-Che Cheng; Szu-Yun Tai; Chih-Cheng Chien
Journal:  PLoS One       Date:  2013-06-24       Impact factor: 3.240

9.  A network-based gene expression signature informs prognosis and treatment for colorectal cancer patients.

Authors:  Mingguang Shi; R Daniel Beauchamp; Bing Zhang
Journal:  PLoS One       Date:  2012-07-23       Impact factor: 3.240

10.  Faecal ribosomal protein L19 is a genetic prognostic factor for survival in colorectal cancer.

Authors:  C-J Huang; C-C Chien; S-H Yang; C-C Chang; H-L Sun; Y-C Cheng; C-C Liu; S-C Lin; C-M Lin
Journal:  J Cell Mol Med       Date:  2008-02-04       Impact factor: 5.310

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  5 in total

1.  Whole exome sequencing identifies novel germline variants of SLC15A4 gene as potentially cancer predisposing in familial colorectal cancer.

Authors:  Diamanto Skopelitou; Aayushi Srivastava; Beiping Miao; Abhishek Kumar; Dagmara Dymerska; Nagarajan Paramasivam; Matthias Schlesner; Jan Lubinski; Kari Hemminki; Asta Försti; Obul Reddy Bandapalli
Journal:  Mol Genet Genomics       Date:  2022-05-13       Impact factor: 2.980

2.  Ketogenic HMG-CoA lyase and its product β-hydroxybutyrate promote pancreatic cancer progression.

Authors:  Victoire Gouirand; Tristan Gicquel; Evan C Lien; Emilie Jaune-Pons; Quentin Da Costa; Pascal Finetti; Elodie Metay; Camille Duluc; Jared R Mayers; Stephane Audebert; Luc Camoin; Laurence Borge; Marion Rubis; Julie Leca; Jeremy Nigri; François Bertucci; Nelson Dusetti; Juan L Iovanna; Richard Tomasini; Ghislain Bidaut; Fabienne Guillaumond; Matthew G Vander Heiden; Sophie Vasseur
Journal:  EMBO J       Date:  2022-03-21       Impact factor: 14.012

3.  Comprehensive analysis of metastasis-related genes reveals a gene signature predicting the survival of colon cancer patients.

Authors:  Haotang Wei; Jilin Li; Minzhi Xie; Ronger Lei; Bangli Hu
Journal:  PeerJ       Date:  2018-08-21       Impact factor: 2.984

4.  Yeast expression of mammalian Onzin and fungal FCR1 suggests ancestral functions of PLAC8 proteins in mitochondrial metabolism and DNA repair.

Authors:  Stefania Daghino; Luigi Di Vietro; Luca Petiti; Elena Martino; Cristina Dallabona; Tiziana Lodi; Silvia Perotto
Journal:  Sci Rep       Date:  2019-04-29       Impact factor: 4.379

5.  SLC15A4 Serves as a Novel Prognostic Biomarker and Target for Lung Adenocarcinoma.

Authors:  Hui Huang; Junwei Wang; Shibin Chen; HongJiang He; Yu Shang; Xiaorong Guo; Ge Lou; Jingjing Ji; Mian Guo; Hong Chen; Shan Yu
Journal:  Front Genet       Date:  2021-06-08       Impact factor: 4.599

  5 in total

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