Literature DB >> 27895266

A simple method to estimate the time-dependent receiver operating characteristic curve and the area under the curve with right censored data.

Liang Li1, Tom Greene2, Bo Hu3.   

Abstract

The time-dependent receiver operating characteristic curve is often used to study the diagnostic accuracy of a single continuous biomarker, measured at baseline, on the onset of a disease condition when the disease onset may occur at different times during the follow-up and hence may be right censored. Due to right censoring, the true disease onset status prior to the pre-specified time horizon may be unknown for some patients, which causes difficulty in calculating the time-dependent sensitivity and specificity. We propose to estimate the time-dependent sensitivity and specificity by weighting the censored data by the conditional probability of disease onset prior to the time horizon given the biomarker, the observed time to event, and the censoring indicator, with the weights calculated nonparametrically through a kernel regression on time to event. With this nonparametric weighting adjustment, we derive a novel, closed-form formula to calculate the area under the time-dependent receiver operating characteristic curve. We demonstrate through numerical study and theoretical arguments that the proposed method is insensitive to misspecification of the kernel bandwidth, produces unbiased and efficient estimators of time-dependent sensitivity and specificity, the area under the curve, and other estimands from the receiver operating characteristic curve, and outperforms several other published methods currently implemented in R packages.

Entities:  

Keywords:  Biomarker; diagnostic medicine; prediction accuracy; receiver operating characteristic; survival prediction

Mesh:

Year:  2016        PMID: 27895266     DOI: 10.1177/0962280216680239

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  19 in total

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Journal:  J R Stat Soc Ser C Appl Stat       Date:  2018-12-23       Impact factor: 1.864

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Journal:  Front Immunol       Date:  2022-06-13       Impact factor: 8.786

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7.  Deep learning for the dynamic prediction of multivariate longitudinal and survival data.

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Journal:  Stat Med       Date:  2022-03-28       Impact factor: 2.497

8.  Dynamic prediction of time to a clinical event with sparse and irregularly measured longitudinal biomarkers.

Authors:  Yayuan Zhu; Xuelin Huang; Liang Li
Journal:  Biom J       Date:  2020-03-20       Impact factor: 2.207

9.  Backward joint model and dynamic prediction of survival with multivariate longitudinal data.

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Journal:  Stat Med       Date:  2021-05-20       Impact factor: 2.497

10.  Validation of discrete time-to-event prediction models in the presence of competing risks.

Authors:  Rachel Heyard; Jean-François Timsit; Leonhard Held
Journal:  Biom J       Date:  2019-07-31       Impact factor: 2.207

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