Literature DB >> 27894815

The Histone Variant H3.3 in Transcriptional Regulation and Human Disease.

Leilei Shi1, Hong Wen1, Xiaobing Shi2.   

Abstract

Histone proteins wrap around DNA to form nucleosomes, which further compact into the higher-order structure of chromatin. In addition to the canonical histones, there are also variant histones that often have pivotal roles in regulating chromatin dynamics and in the accessibility of the underlying DNA. H3.3 is the most common non-centromeric variant of histone H3 that differs from the canonical H3 by just 4-5 aa. Here, we discuss the current knowledge of H3.3 in transcriptional regulation and the recent discoveries and molecular mechanisms of H3.3 mutations in human cancer.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DAXX; H3.3; HIRA; epigenetics; human cancer

Mesh:

Substances:

Year:  2016        PMID: 27894815      PMCID: PMC5446305          DOI: 10.1016/j.jmb.2016.11.019

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  121 in total

1.  BS69, an adenovirus E1A-associated protein, inhibits the transcriptional activity of c-Myb.

Authors:  N E Ladendorff; S Wu; J S Lipsick
Journal:  Oncogene       Date:  2001-01-04       Impact factor: 9.867

2.  Genome-scale profiling of histone H3.3 replacement patterns.

Authors:  Yoshiko Mito; Jorja G Henikoff; Steven Henikoff
Journal:  Nat Genet       Date:  2005-09-11       Impact factor: 38.330

3.  Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription.

Authors:  Ray Kit Ng; J B Gurdon
Journal:  Nat Cell Biol       Date:  2007-12-09       Impact factor: 28.824

Review 4.  Histone variants in pluripotency and disease.

Authors:  Peter J Skene; Steven Henikoff
Journal:  Development       Date:  2013-06       Impact factor: 6.868

5.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

6.  Daxx, a novel Fas-binding protein that activates JNK and apoptosis.

Authors:  X Yang; R Khosravi-Far; H Y Chang; D Baltimore
Journal:  Cell       Date:  1997-06-27       Impact factor: 41.582

7.  Loss of Daxx, a promiscuously interacting protein, results in extensive apoptosis in early mouse development.

Authors:  J S Michaelson; D Bader; F Kuo; C Kozak; P Leder
Journal:  Genes Dev       Date:  1999-08-01       Impact factor: 11.361

8.  Histone H1 binding is inhibited by histone variant H3.3.

Authors:  Ulrich Braunschweig; Greg J Hogan; Ludo Pagie; Bas van Steensel
Journal:  EMBO J       Date:  2009-10-15       Impact factor: 11.598

9.  Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.

Authors:  Simon J Elsässer; Laura A Banaszynski; Kyung-Min Noh; Nichole Diaz; C David Allis
Journal:  Nature       Date:  2015-05-04       Impact factor: 49.962

10.  A subset of replication-dependent histone mRNAs are expressed as polyadenylated RNAs in terminally differentiated tissues.

Authors:  Shawn M Lyons; Clark H Cunningham; Joshua D Welch; Beezly Groh; Andrew Y Guo; Bruce Wei; Michael L Whitfield; Yue Xiong; William F Marzluff
Journal:  Nucleic Acids Res       Date:  2016-07-08       Impact factor: 16.971

View more
  19 in total

Review 1.  The tale of a tail: histone H4 acetylation and the repair of DNA breaks.

Authors:  Surbhi Dhar; Ozge Gursoy-Yuzugullu; Ramya Parasuram; Brendan D Price
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 2.  The Roles of Histone Modifications in Metal-Induced Neurological Disorders.

Authors:  Yingying Wu; Ruike Wang; Rundong Liu; Yue Ba; Hui Huang
Journal:  Biol Trace Elem Res       Date:  2022-02-07       Impact factor: 3.738

3.  Postmitotic accumulation of histone variant H3.3 in new cortical neurons establishes neuronal chromatin, transcriptome, and identity.

Authors:  Owen H Funk; Yaman Qalieh; Daniel Z Doyle; Mandy M Lam; Kenneth Y Kwan
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-05       Impact factor: 12.779

4.  Histone variant H3.3 maintains adult haematopoietic stem cell homeostasis by enforcing chromatin adaptability.

Authors:  Peipei Guo; Ying Liu; Fuqiang Geng; Andrew W Daman; Xiaoyu Liu; Liangwen Zhong; Arjun Ravishankar; Raphael Lis; José Gabriel Barcia Durán; Tomer Itkin; Fanying Tang; Tuo Zhang; Jenny Xiang; Koji Shido; Bi-Sen Ding; Duancheng Wen; Steven Z Josefowicz; Shahin Rafii
Journal:  Nat Cell Biol       Date:  2021-12-27       Impact factor: 28.213

Review 5.  Histone variants in skeletal myogenesis.

Authors:  Nandini Karthik; Reshma Taneja
Journal:  Epigenetics       Date:  2020-08-02       Impact factor: 4.528

6.  Potential functions of histone H3.3 lysine 56 acetylation in mammals.

Authors:  Lei Fang; Danqi Chen; Jingzi Zhang; Hongjie Li; Beatrix Bradford; Chunyuan Jin
Journal:  Epigenetics       Date:  2021-05-24       Impact factor: 4.861

7.  The role of HIRA-dependent H3.3 deposition and its modifications in the somatic hypermutation of immunoglobulin variable regions.

Authors:  Guojun Yu; Yongwei Zhang; Varun Gupta; Jinghang Zhang; Thomas MacCarthy; Zhi Duan; Matthew D Scharff
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-14       Impact factor: 12.779

8.  TGF-β1 promotes expression of fibrosis-related genes through the induction of histone variant H3.3 and histone chaperone HIRA.

Authors:  Toshihiro Shindo; Shigehiro Doi; Ayumu Nakashima; Kensuke Sasaki; Koji Arihiro; Takao Masaki
Journal:  Sci Rep       Date:  2018-09-19       Impact factor: 4.379

9.  Histone H3.3 phosphorylation amplifies stimulation-induced transcription.

Authors:  Anja Armache; Shuang Yang; Alexia Martínez de Paz; Lexi E Robbins; Ceyda Durmaz; Jin Q Cheong; Arjun Ravishankar; Andrew W Daman; Dughan J Ahimovic; Thaís Klevorn; Yuan Yue; Tanja Arslan; Shu Lin; Tanya Panchenko; Joel Hrit; Miao Wang; Samuel Thudium; Benjamin A Garcia; Erica Korb; Karim-Jean Armache; Scott B Rothbart; Sandra B Hake; C David Allis; Haitao Li; Steven Z Josefowicz
Journal:  Nature       Date:  2020-07-22       Impact factor: 49.962

10.  Functional activity of the H3.3 histone chaperone complex HIRA requires trimerization of the HIRA subunit.

Authors:  Dominique Ray-Gallet; M Daniel Ricketts; Yukari Sato; Kushol Gupta; Ekaterina Boyarchuk; Toshiya Senda; Ronen Marmorstein; Geneviève Almouzni
Journal:  Nat Commun       Date:  2018-08-06       Impact factor: 14.919

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.