Literature DB >> 27893193

The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T is genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72.

Helisson Faoro1,2, Rodrigo Rene Menegazzo1, Federico Battistoni3, Prasad Gyaneshwar4, Fernanda P do Amaral5, Cecilia Taulé3, Sydnee Rausch4, Patricia Gonçalves Galvão6, Cecilia de Los Santos3, Shubhajit Mitra4, Gabriela Heijo3, Shih-Yi Sheu7, Wen-Ming Chen7, Cintia Mareque3, Michelle Zibetti Tadra-Sfeir1, J Ivo Baldani6, Marta Maluk8, Ana Paula Guimarães6, Gary Stacey5, Emanuel M de Souza1, Fabio O Pedrosa1, Leonardo Magalhães Cruz1, Euan K James8.   

Abstract

The genome of Azoarcus olearius DQS-4T , a N2 -fixing Betaproteobacterium isolated from oil-contaminated soil in Taiwan, was sequenced and compared with other Azoarcus strains. The genome sequence showed high synteny with Azoarcus sp. BH72, a model endophytic diazotroph, but low synteny with five non-plant-associated strains (Azoarcus CIB, Azoarcus EBN1, Azoarcus KH32C, A. toluclasticus MF63T and Azoarcus PA01). Average Nucleotide Identity (ANI) revealed that DQS-4T shares 98.98% identity with Azoarcus BH72, which should now be included in the species A. olearius. The genome of DQS-4T contained several genes related to plant colonization and plant growth promotion, such as nitrogen fixation, plant adhesion and root surface colonization. In accordance with the presence of these genes, DQS-4T colonized rice (Oryza sativa) and Setaria viridis, where it was observed within the intercellular spaces and aerenchyma mainly of the roots. Although they promote the growth of grasses, the mechanism(s) of plant growth promotion by A. olearius strains is unknown, as the genomes of DQS-4T and BH72 do not contain genes for indole acetic acid (IAA) synthesis nor phosphate solubilization. In spite of its original source, both the genome and behaviour of DQS-4T suggest that it has the capacity to be an endophytic, nitrogen-fixing plant growth-promoting bacterium.
© 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

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Year:  2017        PMID: 27893193     DOI: 10.1111/1758-2229.12502

Source DB:  PubMed          Journal:  Environ Microbiol Rep        ISSN: 1758-2229            Impact factor:   3.541


  9 in total

1.  Discovery of an Inducible Toluene Monooxygenase That Cooxidizes 1,4-Dioxane and 1,1-Dichloroethylene in Propanotrophic Azoarcus sp. Strain DD4.

Authors:  Daiyong Deng; Dung Ngoc Pham; Fei Li; Mengyan Li
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

2.  Comparative Genomics Reveal the High Conservation and Scarce Distribution of Nitrogen Fixation nif Genes in the Plant-Associated Genus Herbaspirillum.

Authors:  Ana Marina Pedrolo; Filipe Pereira Matteoli; Cláudio Roberto Fônseca Sousa Soares; Ana Carolina Maisonnave Arisi
Journal:  Microb Ecol       Date:  2022-08-06       Impact factor: 4.192

3.  Genomic characterization of Nitrospirillum amazonense strain CBAmC, a nitrogen-fixing bacterium isolated from surface-sterilized sugarcane stems.

Authors:  Stefan Schwab; Leonardo Araujo Terra; José Ivo Baldani
Journal:  Mol Genet Genomics       Date:  2018-04-25       Impact factor: 3.291

Review 4.  Manipulating nitrogen regulation in diazotrophic bacteria for agronomic benefit.

Authors:  Marcelo Bueno Batista; Ray Dixon
Journal:  Biochem Soc Trans       Date:  2019-04-01       Impact factor: 5.407

5.  Complete Genome Sequence of Azoarcus sp. Strain DD4, a Gram-Negative Propanotroph That Degrades 1,4-Dioxane and 1,1-Dichloroethylene.

Authors:  Daiyong Deng; Fei Li; Lei Ye; Mengyan Li
Journal:  Microbiol Resour Announc       Date:  2019-08-15

6.  Comparative Genomics Provides Insights into the Taxonomy of Azoarcus and Reveals Separate Origins of Nif Genes in the Proposed Azoarcus and Aromatoleum Genera.

Authors:  Roberto Tadeu Raittz; Camilla Reginatto De Pierri; Marta Maluk; Marcelo Bueno Batista; Manuel Carmona; Madan Junghare; Helisson Faoro; Leonardo M Cruz; Federico Battistoni; Emanuel de Souza; Fábio de Oliveira Pedrosa; Wen-Ming Chen; Philip S Poole; Ray A Dixon; Euan K James
Journal:  Genes (Basel)       Date:  2021-01-07       Impact factor: 4.141

7.  Plant Growth-promoting Effects of Viable and Dead Spores of Bacillus pumilus TUAT1 on Setaria viridis.

Authors:  Shin-Ichiro Agake; Fernanda Plucani do Amaral; Tetsuya Yamada; Hitoshi Sekimoto; Gary Stacey; Tadashi Yokoyama; Naoko Ohkama-Ohtsu
Journal:  Microbes Environ       Date:  2022       Impact factor: 2.912

8.  Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae.

Authors:  Paulina Estrada-de Los Santos; Marike Palmer; Belén Chávez-Ramírez; Chrizelle Beukes; Emma T Steenkamp; Leah Briscoe; Noor Khan; Marta Maluk; Marcel Lafos; Ethan Humm; Monique Arrabit; Matthew Crook; Eduardo Gross; Marcelo F Simon; Fábio Bueno Dos Reis Junior; William B Whitman; Nicole Shapiro; Philip S Poole; Ann M Hirsch; Stephanus N Venter; Euan K James
Journal:  Genes (Basel)       Date:  2018-08-01       Impact factor: 4.096

Review 9.  Are we there yet? The long walk towards the development of efficient symbiotic associations between nitrogen-fixing bacteria and non-leguminous crops.

Authors:  Vânia C S Pankievicz; Thomas B Irving; Lucas G S Maia; Jean-Michel Ané
Journal:  BMC Biol       Date:  2019-12-03       Impact factor: 7.431

  9 in total

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