Literature DB >> 27880917

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

Nicole St-Denis1, Gagan D Gupta1, Zhen Yuan Lin1, Beatriz Gonzalez-Badillo1, Amanda O Veri2, James D R Knight1, Dushyandi Rajendran1, Amber L Couzens1, Ko W Currie2, Johnny M Tkach1, Sally W T Cheung1, Laurence Pelletier3, Anne-Claude Gingras4.   

Abstract

Reversible phosphorylation is a fundamental regulatory mechanism, intricately coordinated by kinases and phosphatases, two classes of enzymes widely disrupted in human disease. To better understand the functions of the relatively understudied phosphatases, we have used complementary affinity purification and proximity-based interaction proteomics approaches to generate a physical interactome for 140 human proteins harboring phosphatase catalytic domains. We identified 1,335 high-confidence interactions (1,104 previously unreported), implicating these phosphatases in the regulation of a variety of cellular processes. Systematic phenotypic profiling of phosphatase catalytic and regulatory subunits revealed that phosphatases from every evolutionary family impinge on mitosis. Using clues from the interactome, we have uncovered unsuspected roles for DUSP19 in mitotic exit, CDC14A in regulating microtubule integrity, PTPRF in mitotic retraction fiber integrity, and DUSP23 in centriole duplication. The functional phosphatase interactome further provides a rich resource for ascribing functions for this important class of enzymes. Copyright Â
© 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CDC14A; DUSP19; DUSP23; PLK4; PTPRF; interactome; mitosis; phosphatase; phosphorylation; proteomics

Mesh:

Substances:

Year:  2016        PMID: 27880917     DOI: 10.1016/j.celrep.2016.10.078

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  40 in total

1.  The homophilic receptor PTPRK selectively dephosphorylates multiple junctional regulators to promote cell-cell adhesion.

Authors:  Gareth W Fearnley; Katherine A Young; James R Edgar; Robin Antrobus; Iain M Hay; Wei-Ching Liang; Nadia Martinez-Martin; WeiYu Lin; Janet E Deane; Hayley J Sharpe
Journal:  Elife       Date:  2019-03-29       Impact factor: 8.140

2.  A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.

Authors:  Zhong Yao; Katelyn Darowski; Nicole St-Denis; Victoria Wong; Fabian Offensperger; Annabel Villedieu; Shahreen Amin; Ramy Malty; Hiroyuki Aoki; Hongbo Guo; Yang Xu; Caterina Iorio; Max Kotlyar; Andrew Emili; Igor Jurisica; Benjamin G Neel; Mohan Babu; Anne-Claude Gingras; Igor Stagljar
Journal:  Mol Cell       Date:  2017-01-05       Impact factor: 17.970

3.  A Versatile Lentiviral Delivery Toolkit for Proximity-dependent Biotinylation in Diverse Cell Types.

Authors:  Payman Samavarchi-Tehrani; Hala Abdouni; Reuben Samson; Anne-Claude Gingras
Journal:  Mol Cell Proteomics       Date:  2018-07-10       Impact factor: 5.911

4.  Synthetic Essentiality of Metabolic Regulator PDHK1 in PTEN-Deficient Cells and Cancers.

Authors:  Nilanjana Chatterjee; Evangelos Pazarentzos; Manasi K Mayekar; Philippe Gui; David V Allegakoen; Gorjan Hrustanovic; Victor Olivas; Luping Lin; Erik Verschueren; Jeffrey R Johnson; Matan Hofree; Jenny J Yan; Billy W Newton; John V Dollen; Charles H Earnshaw; Jennifer Flanagan; Elton Chan; Saurabh Asthana; Trey Ideker; Wei Wu; Junji Suzuki; Benjamin A Barad; Yuriy Kirichok; James S Fraser; William A Weiss; Nevan J Krogan; Asmin Tulpule; Amit J Sabnis; Trever G Bivona
Journal:  Cell Rep       Date:  2019-08-27       Impact factor: 9.423

5.  Systems analysis of RhoGEF and RhoGAP regulatory proteins reveals spatially organized RAC1 signalling from integrin adhesions.

Authors:  Paul M Müller; Juliane Rademacher; Richard D Bagshaw; Celina Wortmann; Carolin Barth; Jakobus van Unen; Keziban M Alp; Girolamo Giudice; Rebecca L Eccles; Louise E Heinrich; Patricia Pascual-Vargas; Marta Sanchez-Castro; Lennart Brandenburg; Geraldine Mbamalu; Monika Tucholska; Lisa Spatt; Maciej T Czajkowski; Robert-William Welke; Sunqu Zhang; Vivian Nguyen; Trendelina Rrustemi; Philipp Trnka; Kiara Freitag; Brett Larsen; Oliver Popp; Philipp Mertins; Anne-Claude Gingras; Frederick P Roth; Karen Colwill; Chris Bakal; Olivier Pertz; Tony Pawson; Evangelia Petsalaki; Oliver Rocks
Journal:  Nat Cell Biol       Date:  2020-03-23       Impact factor: 28.824

6.  Combined proximity labeling and affinity purification-mass spectrometry workflow for mapping and visualizing protein interaction networks.

Authors:  Xiaonan Liu; Kari Salokas; Rigbe G Weldatsadik; Lisa Gawriyski; Markku Varjosalo
Journal:  Nat Protoc       Date:  2020-08-10       Impact factor: 13.491

7.  CDC14A phosphatase is essential for hearing and male fertility in mouse and human.

Authors:  Ayesha Imtiaz; Inna A Belyantseva; Alisha J Beirl; Cristina Fenollar-Ferrer; Rasheeda Bashir; Ihtisham Bukhari; Amal Bouzid; Uzma Shaukat; Hela Azaiez; Kevin T Booth; Kimia Kahrizi; Hossein Najmabadi; Azra Maqsood; Elizabeth A Wilson; Tracy S Fitzgerald; Abdelaziz Tlili; Rafal Olszewski; Merete Lund; Taimur Chaudhry; Atteeq U Rehman; Matthew F Starost; Ali M Waryah; Michael Hoa; Lijin Dong; Robert J Morell; Richard J H Smith; Sheikh Riazuddin; Saber Masmoudi; Katie S Kindt; Sadaf Naz; Thomas B Friedman
Journal:  Hum Mol Genet       Date:  2018-03-01       Impact factor: 6.150

8.  Tyr(less) kinase signaling during mitosis.

Authors:  Sabine Elowe
Journal:  Cell Cycle       Date:  2017-03-15       Impact factor: 4.534

9.  APEX2-mediated RAB proximity labeling identifies a role for RAB21 in clathrin-independent cargo sorting.

Authors:  Tomas Del Olmo; Annie Lauzier; Caroline Normandin; Raphaëlle Larcher; Mia Lecours; Dominique Jean; Louis Lessard; Florian Steinberg; François-Michel Boisvert; Steve Jean
Journal:  EMBO Rep       Date:  2019-01-03       Impact factor: 8.807

10.  Direct interactions of mitotic arrest deficient 1 (MAD1) domains with each other and MAD2 conformers are required for mitotic checkpoint signaling.

Authors:  Wenbin Ji; Yibo Luo; Ejaz Ahmad; Song-Tao Liu
Journal:  J Biol Chem       Date:  2017-11-21       Impact factor: 5.157

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