Literature DB >> 27876400

A dynamic regression analysis tool for quantitative assessment of bacterial growth written in Python.

Jennifer L Hoeflinger1, Daniel E Hoeflinger1, Michael J Miller2.   

Abstract

Herein, an open-source method to generate quantitative bacterial growth data from high-throughput microplate assays is described. The bacterial lag time, maximum specific growth rate, doubling time and delta OD are reported. Our method was validated by carbohydrate utilization of lactobacilli, and visual inspection revealed 94% of regressions were deemed excellent.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Bacterial growth; Growth kinetics; Logistic growth; Python; Regression analysis

Mesh：

Substances：

Year:  2016        PMID： 27876400     DOI： 10.1016/j.mimet.2016.11.015

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN： 0167-7012            Impact factor:   2.363


  9 in total

1.  Design, Spectroscopy, and Assessment of Cholinesterase Inhibition and Antimicrobial Activities of Novel Coumarin-Thiadiazole Hybrids.

Authors:  Dariusz Karcz; Karolina Starzak; Ewa Ciszkowicz; Katarzyna Lecka-Szlachta; Daniel Kamiński; Bernadette Creaven; Anna Miłoś; Hollie Jenkins; Lidia Ślusarczyk; Arkadiusz Matwijczuk
Journal:  Int J Mol Sci       Date:  2022-06-05       Impact factor: 6.208

2.  Four Types of TiO2 Reduced the Growth of Selected Lactic Acid Bacteria Strains.

Authors:  Ewa Baranowska-Wójcik; Klaudia Gustaw; Dominik Szwajgier; Patryk Oleszczuk; Bożena Pawlikowska-Pawlęga; Jarosław Pawelec; Justyna Kapral-Piotrowska
Journal:  Foods       Date:  2021-04-25

3.  Isolation and characterization of a new fructophilic Lactobacillus plantarum FPL strain from honeydew.

Authors:  Klaudia Gustaw; Magdalena Michalak; Magdalena Polak-Berecka; Adam Waśko
Journal:  Ann Microbiol       Date:  2018-06-01       Impact factor: 2.112

4.  Persistent and sporadic Listeria monocytogenes strains do not differ when growing at 37 °C, in planktonic state, under different food associated stresses or energy sources.

Authors:  Alexander J Taylor; Matthew J Stasiewicz
Journal:  BMC Microbiol       Date:  2019-11-19       Impact factor: 3.605

5.  Non-Typical Fluorescence Effects and Biological Activity in Selected 1,3,4-thiadiazole Derivatives: Spectroscopic and Theoretical Studies on Substituent, Molecular Aggregation, and pH Effects.

Authors:  Iwona Budziak; Dariusz Karcz; Marcin Makowski; Kamila Rachwał; Karolina Starzak; Alicja Matwijczuk; Beata Myśliwa-Kurdziel; Anna Oniszczuk; Maciej Combrzyński; Anna Podleśna; Arkadiusz Matwijczuk
Journal:  Int J Mol Sci       Date:  2019-11-04       Impact factor: 5.923

6.  Prebiotic Potential of Oligosaccharides Obtained by Acid Hydrolysis of α-(1→3)-Glucan from Laetiporus sulphureus: A Pilot Study.

Authors:  Adrian Wiater; Adam Waśko; Paulina Adamczyk; Klaudia Gustaw; Małgorzata Pleszczyńska; Kamila Wlizło; Marcin Skowronek; Michał Tomczyk; Janusz Szczodrak
Journal:  Molecules       Date:  2020-11-26       Impact factor: 4.411

7.  Biological Activity of an Epilobium angustifolium L. (Fireweed) Infusion after In Vitro Digestion.

Authors:  Klaudia Kowalik; Magdalena Polak-Berecka; Monika Prendecka-Wróbel; Dominika Pigoń-Zając; Iwona Niedźwiedź; Dominik Szwajgier; Ewa Baranowska-Wójcik; Adam Waśko
Journal:  Molecules       Date:  2022-02-02       Impact factor: 4.411

8.  Effect of TiO2 on Selected Pathogenic and Opportunistic Intestinal Bacteria.

Authors:  Ewa Baranowska-Wójcik; Dominik Szwajgier; Klaudia Gustaw
Journal:  Biol Trace Elem Res       Date:  2021-07-23       Impact factor: 4.081

9.  Morphological and physiological changes in Lentilactobacillus hilgardii cells after cold plasma treatment.

Authors:  Iwona Niedźwiedź; Wojciech Juzwa; Krzysztof Skrzypiec; Tomasz Skrzypek; Adam Waśko; Michał Kwiatkowski; Joanna Pawłat; Magdalena Polak-Berecka
Journal:  Sci Rep       Date:  2020-11-03       Impact factor: 4.379
  9 in total

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