Literature DB >> 27874109

Molecular electrometer and binding of cations to phospholipid bilayers.

Andrea Catte1, Mykhailo Girych2, Matti Javanainen3, Claire Loison4, Josef Melcr5, Markus S Miettinen6, Luca Monticelli7, Jukka Määttä8, Vasily S Oganesyan1, O H Samuli Ollila2, Joona Tynkkynen9, Sergey Vilov4.   

Abstract

Despite the vast amount of experimental and theoretical studies on the binding affinity of cations - especially the biologically relevant Na+ and Ca2+ - for phospholipid bilayers, there is no consensus in the literature. Here we show that by interpreting changes in the choline headgroup order parameters according to the 'molecular electrometer' concept [Seelig et al., Biochemistry, 1987, 26, 7535], one can directly compare the ion binding affinities between simulations and experiments. Our findings strongly support the view that in contrast to Ca2+ and other multivalent ions, Na+ and other monovalent ions (except Li+) do not specifically bind to phosphatidylcholine lipid bilayers at sub-molar concentrations. However, the Na+ binding affinity was overestimated by several molecular dynamics simulation models, resulting in artificially positively charged bilayers and exaggerated structural effects in the lipid headgroups. While qualitatively correct headgroup order parameter response was observed with Ca2+ binding in all the tested models, no model had sufficient quantitative accuracy to interpret the Ca2+:lipid stoichiometry or the induced atomistic resolution structural changes. All scientific contributions to this open collaboration work were made publicly, using nmrlipids.blogspot.fi as the main communication platform.

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Year:  2016        PMID: 27874109     DOI: 10.1039/c6cp04883h

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  22 in total

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Journal:  Biophys J       Date:  2018-09-06       Impact factor: 4.033

5.  Graph-Theoretic Analysis of Monomethyl Phosphate Clustering in Ionic Solutions.

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7.  The role of ion-lipid interactions and lipid packing in transient defects caused by phenolic compounds.

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8.  Transmembrane potential of physiologically relevant model membranes: Effects of membrane asymmetry.

Authors:  Xubo Lin; Alemayehu A Gorfe
Journal:  J Chem Phys       Date:  2020-09-14       Impact factor: 3.488

9.  Lipid Configurations from Molecular Dynamics Simulations.

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Journal:  Biophys J       Date:  2018-04-24       Impact factor: 4.033

10.  Using Open Data to Rapidly Benchmark Biomolecular Simulations: Phospholipid Conformational Dynamics.

Authors:  Hanne S Antila; Tiago M Ferreira; O H Samuli Ollila; Markus S Miettinen
Journal:  J Chem Inf Model       Date:  2021-01-26       Impact factor: 4.956

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