| Literature DB >> 27869681 |
Martina Vrsanska1, Stanislava Voberkova2,3, Vratislav Langer4, Dagmar Palovcikova5, Amitava Moulick6,7, Vojtech Adam8,9, Pavel Kopel10,11.
Abstract
Ligninolytic enzymes, such as laccase,Entities:
Keywords: copper complex; enzymatic induction; laccase; peroxidase; trimesic acid
Mesh:
Substances:
Year: 2016 PMID: 27869681 PMCID: PMC6274549 DOI: 10.3390/molecules21111553
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Structural formulas of the complex cations [Cu3(pmdien)3(btc)]3+, where pmdien = N,N,N′,N′′,N′′-pentamethyl-diethylenetriamine, (M2) (A) and [Cu3(mdpta)3(btc)]3+, where mdpta = N,N-bis-(3-aminopropyl)methylamine), (M3) (B).
Figure 2Numbering scheme for M1with atomic displacement ellipsoids drawn at the 50% probability level. Hydrogen atoms omitted for clarity (A). Hydrogen-bond pattern of the benzenetricarboxylic ion. The hydrogens involved in hydrogen bonds are shown only (B). Oxygen (red), nitrogen (dark blue), copper (light blue), hydrogen (green).
Selected bond lengths (Å) and angles (°) for M1.
| Cu(1)-N(1B) | 2.0099 (15) | Cu(2)-N(1D) | 2.0156 (15) |
| Cu(1)-N(1B) i | 2.0099 (15) | Cu(2)-N(1D) ii | 2.0156 (15) |
| Cu(1)-N(1A) i | 2.0219 (14) | Cu(2)-N(1C) ii | 2.0219 (14) |
| Cu(1)-N(1A) | 2.0220 (14) | Cu(2)-N(1C) | 2.0220 (14) |
| N(1B)-Cu(1)-N(1B) i | 180.0 | N(1D)-Cu(2)-N(1D) ii | 179.999 (2) |
| N(1B)-Cu(1)-N(1A) i | 90.23 (6) | N(1D)-Cu(2)-N(1C) ii | 90.65 (6) |
| N(1B)i-Cu(1)-N(1A) i | 89.77 (6) | N(1D) ii-Cu(2)-N(1C) ii | 89.35 (6) |
| N(1B)-Cu(1)-N(1A) | 89.77 (6) | N(1D)-Cu(2)-N(1C) | 89.35 (6) |
| N(1B)i-Cu(1)-N(1A) | 90.23 (6) | N(1D) ii-Cu(2)-N(1C) | 90.65 (6) |
| N(1A)i-Cu(1)-N(1A) | 180.0 | N(1C) ii-Cu(2)-N(1C) | 180.0 |
Symmetry transformations used to generate equivalent atoms: i: −x, − y + 1, −z; ii: − x + 1, − y + 1, − z + 1.
Hydrogen bonds for M1 (Å) and (°).
| D-H...A | d(D-H) | d(H...A) | d(D...A) | <(DHA) |
|---|---|---|---|---|
| O(1)-H(11)...O(72) iii | 0.80 (3) | 1.91 (3) | 2.712 (2) | 174 (3) |
| O(1)-H(12)...O(81) iv | 0.86 (3) | 1.90 (3) | 2.7145 (19) | 159 (3) |
| O(2)-H(21)...O(91) i | 0.80 (3) | 1.95 (3) | 2.734 (2) | 169 (3) |
| O(2)-H(22)...O(92) v | 0.83 (3) | 1.90 (3) | 2.726 (2) | 170 (3) |
| O(3)-H(31)...O(91) vi | 0.87 (3) | 1.84 (3) | 2.699 (2) | 167 (2) |
| O(3)-H(32)...O(71) v | 0.78 (3) | 1.85 (3) | 2.616 (2) | 170 (3) |
| O(4)-H(41)...O(2) ii | 0.80 (3) | 2.04 (3) | 2.825 (2) | 166 (2) |
| O(4)-H(42)...O(3) vii | 0.86 (3) | 1.92 (3) | 2.771 (2) | 173 (2) |
| O(5)-H(51)...O(82) i | 0.80 (2) | 1.95 (3) | 2.7472 (19) | 177 (2) |
| O(5)-H(52)...O(82) iv | 0.79 (3) | 2.04 (3) | 2.826 (2) | 174 (2) |
| N(3A)-H(3A)...O(72) viii | 0.88 | 1.86 | 2.7312 (19) | 170.3 |
| N(3B)-H(3B)...O(2) i | 0.88 | 1.99 | 2.853 (2) | 168.2 |
| N(3C)-H(3C)...O(81) iv | 0.88 | 1.96 | 2.813 (2) | 162.6 |
| N(3D)-H(3D)...O(3) i | 0.88 | 1.95 | 2.792 (2) | 159.9 |
| N(1E)-H(1E)...O(92) v | 0.88 | 1.9 | 2.773 (2) | 172.2 |
| N(3E)-H(3E)...O(1) ix | 0.88 | 1.81 | 2.684 (2) | 174.1 |
Symmetry transformations used to generate equivalent atoms: i: −x,− y + 1, −z; ii: − x + 1, − y + 1, −z + 1; iii: x, y−1, z; iv: − x + 1, − y + 1, − z; v: − x + 1, − y + 2, − z + 1; vi: x − 1, y , z; vii: −x, − y + 1, − z + 1; viii: x − 1, y − 1, z; ix: x, y + 1, z.
Figure 3Evaluation of laccase (Lac) (A); lignin peroxidase (LiP) (B) and manganese-dependent peroxidase (MnP) (C) activities of tested white-rot fungi without induction. Standard deviation lines represent the variation of mean activity value obtained from three replicate cultivations. The strains and abbreviations: Trametes versicolor (TV); Trametes suaveolens (TS); Daedaleopsis confragosa (DC); Fomes fomentarius (FF); Trametes gibbosa (TG).
Enzyme activities of Lac, LiP and MnP using different concentrations (0.1, 0.3, 0.5 and 1.0 mM) of copper sulfate and complexes M1, M2 and M3 for the tested fungal strains Trametes versicolor (TV); Trametes suaveolens (TS); Daedaleopsis confragosa (DC); Fomes fomentarius (FF); Trametes gibbosa (TG) after 15 days of cultivation.
| 0.1 mM | Lac (U/L) | LiP (U/L) | MnP (U/L) | 0.3 mM | Lac (U/L) | LiP (U/L) | MnP (U/L) | 0.5 mM | Lac (U/L) | LiP (U/L) | MnP (U/L) | 1.0 mM | Lac (U/L) | LiP (U/L) | MnP (U/L) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 583.30 | 9.44 | 0.54 | 708.30 | 37.40 | 0.15 | 819.40 | 31.50 | 1.20 | 1291.70 | 1.81 | 0.09 | ||||
| 833.30 | 333.30 | 0.02 | 777.80 | 43.90 | 0.14 | 1138.90 | 118.80 | 0.05 | 533.30 | 1.76 | 0.06 | ||||
| 1194.40 | 50.20 | 0.05 | 1472.20 | 26.70 | 0.05 | 555.60 | 11.60 | 0.06 | 344.60 | 0.50 | 0.48 | ||||
| 1305.60 | 135.40 | 0.06 | 1416.70 | 25.30 | 0.03 | 777.80 | 17.80 | 0.09 | 777.80 | 11.70 | 0.05 | ||||
| 987.50 | 17.50 | 0.05 | 444.40 | 17.80 | 0.09 | 1813.50 | 112.50 | 0.47 | 2108.30 | 1.90 | 0.08 | ||||
| 186.10 | 0 | 0 | 175.00 | 15.30 | 0.02 | 3725.20 | 187.80 | 0 | 1234.70 | 1.60 | 0 | ||||
| 152.80 | 52.80 | 0.03 | 206.90 | 15.60 | 0.05 | 253.90 | 53.90 | 0.06 | 11.70 | 0.31 | 0.31 | ||||
| 627.80 | 44.40 | 0.04 | 306.80 | 26.10 | 0 | 1941.70 | 2.04 | 0.77 | 5.10 | 0.55 | 0.05 | ||||
| 569.40 | 69.40 | 0.25 | 569.40 | 16.30 | 0.24 | 597.20 | 34.80 | 0.74 | 750.00 | 0.98 | 0.38 | ||||
| 272.20 | 42.20 | 0.01 | 500.60 | 15.60 | 0 | 516.70 | 80.30 | 0.05 | 413.90 | 1.70 | 0 | ||||
| 83.30 | 16.40 | 0 | 142.30 | 8.90 | 0.05 | 241.20 | 31.60 | 0.04 | 175.40 | 0.65 | 0.27 | ||||
| 84.20 | 21.40 | 0.05 | 469.40 | 460.10 | 0 | 434.70 | 5.10 | 0.05 | 409.40 | 0.33 | 0 | ||||
| 1022.20 | 13.10 | 0.24 | 1133.30 | 14.40 | 0.05 | 1529.20 | 17.70 | 0.05 | 1551.40 | 1.50 | 0.69 | ||||
| 433.30 | 54.30 | 0.03 | 1980.60 | 18.10 | 0.06 | 1719.40 | 101.20 | 0.06 | 715.30 | 2.00 | 0.07 | ||||
| 227.80 | 13.30 | 0.07 | 311.10 | 31.40 | 0.05 | 227.80 | 21.60 | 0.06 | 325.00 | 1.78 | 1.70 | ||||
| 286.10 | 27.40 | 0.08 | 513.90 | 19.90 | 0.04 | 425.00 | 0.74 | 1.03 | 425.00 | 0.40 | 0.08 | ||||
| 100.00 | 16.70 | 0.02 | 106.90 | 18.50 | 0.04 | 108.30 | 18.80 | 0.24 | 156.90 | 0.30 | 0.25 | ||||
| 80.60 | 70.40 | 0.01 | 91.70 | 23.70 | 0 | 463.90 | 69.80 | 0.03 | 136.10 | 0.60 | 0 | ||||
| 350.00 | 38.90 | 0 | 169.40 | 31.20 | 0.05 | 450.40 | 8.00 | 0.04 | 54.70 | 1.65 | 0.05 | ||||
| 1.67 | 41.80 | 0.03 | 380.60 | 19.40 | 0 | 488.90 | 14.30 | 0 | 51.40 | 0.74 | 0.04 |
Figure 4Evaluation of laccase activity of TV, Trametes versicolor (A); TS, Trametes suaveolens (B); DC, Daedaleopsis confragosa (C); FF, Fomes fomentarius (D); and TG, Trametes gibbosa (E); with a 0.5 mM concentration of inducers. Standard deviation lines represent the variation of the mean activity value obtained from three replicate cultivations.
Figure 5Evaluation of lignin peroxidase activity of TV, Trametes versicolor (A); TS, Trametes suaveolens (B); DC, Daedaleopsis confragosa (C); FF, Fomes fomentarius (D); and TG, Trametes gibbosa (E), with a 0.5 mM concentration of inducers. Standard deviation lines represent the variation of the mean activity value obtained from three replicate cultivations.
Figure 6Evaluation of manganese-dependent peroxidase activity of TV, Trametes versicolor (A); TS, Trametes suaveolens (B); DC, Daedaleopsis confragosa (C); FF, Fomes fomentarius (D); and TG, Trametes gibbosa (E), with a 0.5 mM concentration of inducers. Standard deviation lines represent the variation of mean activity value obtained from three replicate cultivations.