Literature DB >> 27868103

Integrative representations and analyses of vaccine-induced intended protective immunity and unintended adverse events using ontology-based and theory-guided approaches.

Yongqun He1, Edison Ong1, Jiangan Xie1.   

Abstract

Entities:  

Year:  2016        PMID： 27868103      PMCID： PMC5111632          DOI： 10.15761/GVI.1000110

Source DB:  PubMed          Journal:  Glob Vaccines Immunol        ISSN： 2397-575X


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  22 in total

Review 1.  Heterogeneity in vaccine immune response: the role of immunogenetics and the emerging field of vaccinomics.

Authors:  G A Poland; I G Ovsyannikova; R M Jacobson; D I Smith
Journal:  Clin Pharmacol Ther       Date:  2007-10-31       Impact factor: 6.875

Review 2.  Application of pharmacogenomics to vaccines.

Authors:  Gregory A Poland; Inna G Ovsyannikova; Robert M Jacobson
Journal:  Pharmacogenomics       Date:  2009-05       Impact factor: 2.533

Review 3.  Vaccinomics, adversomics, and the immune response network theory: individualized vaccinology in the 21st century.

Authors:  Gregory A Poland; Richard B Kennedy; Brett A McKinney; Inna G Ovsyannikova; Nathaniel D Lambert; Robert M Jacobson; Ann L Oberg
Journal:  Semin Immunol       Date:  2013-06-05       Impact factor: 11.130

4.  Linking MedDRA(®)-Coded Clinical Phenotypes to Biological Mechanisms by the Ontology of Adverse Events: A Pilot Study on Tyrosine Kinase Inhibitors.

Authors:  Sirarat Sarntivijai; Shelley Zhang; Desikan G Jagannathan; Shadia Zaman; Keith K Burkhart; Gilbert S Omenn; Yongqun He; Brian D Athey; Darrell R Abernethy
Journal:  Drug Saf       Date:  2016-07       Impact factor: 5.606

5.  Vaxjo: a web-based vaccine adjuvant database and its application for analysis of vaccine adjuvants and their uses in vaccine development.

Authors:  Samantha Sayers; Guerlain Ulysse; Zuoshuang Xiang; Yongqun He
Journal:  J Biomed Biotechnol       Date:  2012-03-13

6.  Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network.

Authors:  Junguk Hur; Zuoshuang Xiang; Eva L Feldman; Yongqun He
Journal:  BMC Immunol       Date:  2011-08-26       Impact factor: 3.615

7.  Updates on the web-based VIOLIN vaccine database and analysis system.

Authors:  Yongqun He; Rebecca Racz; Samantha Sayers; Yu Lin; Thomas Todd; Junguk Hur; Xinna Li; Mukti Patel; Boyang Zhao; Monica Chung; Joseph Ostrow; Andrew Sylora; Priya Dungarani; Guerlain Ulysse; Kanika Kochhar; Boris Vidri; Kelsey Strait; George W Jourdian; Zuoshuang Xiang
Journal:  Nucleic Acids Res       Date:  2013-11-19       Impact factor: 16.971

Review 8.  Vaccine-derived polioviruses.

Authors:  Cara C Burns; Ousmane M Diop; Roland W Sutter; Olen M Kew
Journal:  J Infect Dis       Date:  2014-11-01       Impact factor: 5.226

9.  VIOLIN: vaccine investigation and online information network.

Authors:  Zuoshuang Xiang; Thomas Todd; Kim P Ku; Bethany L Kovacic; Charles B Larson; Fang Chen; Andrew P Hodges; Yuying Tian; Elizabeth A Olenzek; Boyang Zhao; Lesley A Colby; Howard G Rush; Janet R Gilsdorf; George W Jourdian; Yongqun He
Journal:  Nucleic Acids Res       Date:  2007-11-19       Impact factor: 16.971

10.  OAE: The Ontology of Adverse Events.

Authors:  Yongqun He; Sirarat Sarntivijai; Yu Lin; Zuoshuang Xiang; Abra Guo; Shelley Zhang; Desikan Jagannathan; Luca Toldo; Cui Tao; Barry Smith
Journal:  J Biomed Semantics       Date:  2014-07-05
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  3 in total

1.  COVID-19 vaccine design using reverse and structural vaccinology, ontology-based literature mining and machine learning.

Authors:  Anthony Huffman; Edison Ong; Junguk Hur; Adonis D'Mello; Hervé Tettelin; Yongqun He
Journal:  Brief Bioinform       Date:  2022-07-18       Impact factor: 13.994

2.  Ontology-Based Classification and Analysis of Adverse Events Associated With the Usage of Chloroquine and Hydroxychloroquine.

Authors:  Jamie Ngai; Madison Kalter; James Brian Byrd; Rebecca Racz; Yongqun He
Journal:  Front Pharmacol       Date:  2022-03-23       Impact factor: 5.810

Review 3.  Vaccines Meet Big Data: State-of-the-Art and Future Prospects. From the Classical 3Is ("Isolate-Inactivate-Inject") Vaccinology 1.0 to Vaccinology 3.0, Vaccinomics, and Beyond: A Historical Overview.

Authors:  Nicola Luigi Bragazzi; Vincenza Gianfredi; Milena Villarini; Roberto Rosselli; Ahmed Nasr; Amr Hussein; Mariano Martini; Masoud Behzadifar
Journal:  Front Public Health       Date:  2018-03-05
  3 in total

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