| Literature DB >> 27863956 |
David Bujold1, David Anderson de Lima Morais2, Carol Gauthier2, Catherine Côté1, Maxime Caron1, Tony Kwan1, Kuang Chung Chen3, Jonathan Laperle4, Alexei Nordell Markovits5, Tomi Pastinen6, Bryan Caron3, Alain Veilleux2, Pierre-Étienne Jacques7, Guillaume Bourque8.
Abstract
The International Human Epigenome Consortium (IHEC) coordinates the production of reference epigenome maps through the characterization of the regulome, methylome, and transcriptome from a wide range of tissues and cell types. To define conventions ensuring the compatibility of datasets and establish an infrastructure enabling data integration, analysis, and sharing, we developed the IHEC Data Portal (http://epigenomesportal.ca/ihec). The portal provides access to >7,000 reference epigenomic datasets, generated from >600 tissues, which have been contributed by seven international consortia: ENCODE, NIH Roadmap, CEEHRC, Blueprint, DEEP, AMED-CREST, and KNIH. The portal enhances the utility of these reference maps by facilitating the discovery, visualization, analysis, download, and sharing of epigenomics data. The IHEC Data Portal is the official source to navigate through IHEC datasets and represents a strategy for unifying the distributed data produced by international research consortia. Crown Copyright ÂEntities:
Keywords: API; IHEC; accession; analysis; archival; dataset; epigenomics; metadata; online resource; portal; visualization
Mesh:
Year: 2016 PMID: 27863956 DOI: 10.1016/j.cels.2016.10.019
Source DB: PubMed Journal: Cell Syst ISSN: 2405-4712 Impact factor: 10.304