Literature DB >> 27863033

DNA barcoding of crickets, katydids and grasshoppers (Orthoptera) from Central Europe with focus on Austria, Germany and Switzerland.

O Hawlitschek1,2, J Morinière1, G U C Lehmann3, A W Lehmann4, M Kropf5, A Dunz1, F Glaw1, M Detcharoen1, S Schmidt1, A Hausmann1, N U Szucsich6, S A Caetano-Wyler7, G Haszprunar1,8.   

Abstract

We present a DNA barcoding study on the insect order Orthoptera that was generated in collaboration between four barcoding projects in three countries, viz. Barcoding Fauna Bavarica (Germany), German Barcode of Life, Austrian Barcode of Life and Swiss Barcode of Life. Our data set includes 748 COI sequences from 127 of the 162 taxa (78.4%) recorded in the three countries involved. Ninety-three of these 122 species (76.2%, including all Ensifera) can be reliably identified using DNA barcodes. The remaining 26 caeliferan species (families Acrididae and Tetrigidae) form ten clusters that share barcodes among up to five species, in three cases even across different genera, and in six cases even sharing individual barcodes. We discuss incomplete lineage sorting and hybridization as most likely causes of this phenomenon, as the species concerned are phylogenetically young and hybridization has been previously observed. We also highlight the problem of nuclear mitochondrial pseudogenes (numts), a known problem in the barcoding of orthopteran species, and the possibility of Wolbachia infections. Finally, we discuss the possible taxonomic implications of our barcoding results and point out future research directions.
© 2016 John Wiley & Sons Ltd.

Entities:  

Keywords:  zzm321990Chorthippuszzm321990; BIN sharing; Barcode Index Number; hybridization; numt; pseudogene

Mesh:

Substances:

Year:  2016        PMID: 27863033     DOI: 10.1111/1755-0998.12638

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  17 in total

1.  Exploring Large-Scale Patterns of Genetic Variation in the COI Gene among Insecta: Implications for DNA Barcoding and Threshold-Based Species Delimitation Studies.

Authors:  Haiguang Zhang; Wenjun Bu
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2.  Using Malaise Traps and Metabarcoding for Biodiversity Assessment in Vineyards: Effects of Weather and Trapping Effort.

Authors:  Marvin Kaczmarek; Martin H Entling; Christoph Hoffmann
Journal:  Insects       Date:  2022-05-27       Impact factor: 3.139

3.  Coverage and quality of DNA barcode references for Central and Northern European Odonata.

Authors:  Matthias Geiger; Stephan Koblmüller; Giacomo Assandri; Andreas Chovanec; Torbjørn Ekrem; Iris Fischer; Andrea Galimberti; Michał Grabowski; Elisabeth Haring; Axel Hausmann; Lars Hendrich; Stefan Koch; Tomasz Mamos; Udo Rothe; Björn Rulik; Tomasz Rewicz; Marcia Sittenthaler; Elisabeth Stur; Grzegorz Tończyk; Lukas Zangl; Jerome Moriniere
Journal:  PeerJ       Date:  2021-05-03       Impact factor: 2.984

4.  A DNA barcode library for ground beetles of Germany: the genus Amara Bonelli, 1810 (Insecta, Coleoptera, Carabidae).

Authors:  Michael J Raupach; Karsten Hannig; Jérôme Moriniére; Lars Hendrich
Journal:  Zookeys       Date:  2018-05-17       Impact factor: 1.546

5.  Occurrence of the invasive Spanish slug in gardens: can a citizen science approach help deciphering underlying factors?

Authors:  Daniel Dörler; Matthias Kropf; Gregor Laaha; Johann G Zaller
Journal:  BMC Ecol       Date:  2018-08-02       Impact factor: 2.964

Review 6.  On the role of sex differences for evolution in heterogeneous and changing fitness landscapes: insights from pygmy grasshoppers.

Authors:  Anders Forsman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-10-05       Impact factor: 6.237

7.  Assembling a DNA barcode reference library for the spiders (Arachnida: Araneae) of Pakistan.

Authors:  Muhammad Ashfaq; Gergin Blagoev; Hafiz Muhammad Tahir; Arif M Khan; Muhammad Khalid Mukhtar; Saleem Akhtar; Abida Butt; Shahid Mansoor; Paul D N Hebert
Journal:  PLoS One       Date:  2019-05-22       Impact factor: 3.240

8.  The importance of validated alpha taxonomy for phylogenetic and DNA barcoding studies: a comment on species identification of pygmy grasshoppers (Orthoptera, Tetrigidae).

Authors:  Arne W Lehmann; Hendrik Devriese; Josef Tumbrinck; Josip Skejo; Gerlind U C Lehmann; Axel Hochkirch
Journal:  Zookeys       Date:  2017-06-12       Impact factor: 1.546

9.  Comparative Analysis of Genomic Repeat Content in Gomphocerine Grasshoppers Reveals Expansion of Satellite DNA and Helitrons in Species with Unusually Large Genomes.

Authors:  Abhijeet Shah; Joseph I Hoffman; Holger Schielzeth
Journal:  Genome Biol Evol       Date:  2020-07-01       Impact factor: 3.416

10.  A pipeline for metabarcoding and diet analysis from fecal samples developed for a small semi-aquatic mammal.

Authors:  Oliver Hawlitschek; Angel Fernández-González; Alfonso Balmori-de la Puente; Jose Castresana
Journal:  PLoS One       Date:  2018-08-14       Impact factor: 3.240

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