| Literature DB >> 27858752 |
Katherine E Vest1,2, Luciano H Apponi2,3, Ayan Banerjee1, Grace K Pavlath2, Anita H Corbett1.
Abstract
BACKGROUND: Oculopharyngeal muscular dystrophy (OPMD), a late onset disorder affecting specific skeletal muscles, is caused by a (GCG)n expansion mutation in the gene encoding the mRNA processing protein, polyadenylate binding protein nuclear 1 (PABPN1). The expansion in PABPN1 leads to an increase in a stretch of N-terminal alanine residues in the PABPN1 protein from the normal 10 to 12-18. Given this modest change, detection of mutant protein has not been possible without the use of tagged constructs.Entities:
Keywords: PABPN1; alanine expansion; antibody; muscle disease; oculopharyngeal muscular dystrophy
Year: 2015 PMID: 27858752 PMCID: PMC5207656 DOI: 10.3233/JND-150111
Source DB: PubMed Journal: J Neuromuscul Dis
Primers Used for Cloning WT and Alanine-Expanded PABPN1
| Primer | Sequence |
| PABPN1 | 5′CGGAATTCGCCACCATGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCGGGGGCT |
| WT F | GCGGGCGGTCGGGGCTCCGGGCCGGGGCGGCGGCGCCATCTTGTG-3′ |
| PABPN1 | 5′-GAATTCGCCACCATGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGC |
| A13 F | GGGGGCTGCGGGCGGTCGGGGCTCCGGGCCGGGGCGGCGGCGCCATC-3′ |
| PABPN1 | 5′-GAATTCGCCACCATGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGC |
| A14 F | AGCGGGGGCTGCGGGCGGTCGGGGCTCCGGGCCGGGGCGGCGGCGC-3′ |
| PABPN1 | 5′GAATTCGCCACCATGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGC |
| A15 F | AGCAGCGGGGGCTGCGGGCGGTCGGGGCTCCGGGCCGGGGCGGCGG-3′ |
| PABPN1 | 5′GAATTCGCCACCATGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGC |
| A16 F | AGCAGCAGCGGGGGCTGCGGGCGGTCGGGGCTCCGGGCCGGGGCGG-3′ |
| PABPN1 | 5′CGGAATTCGCCACCATGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
| A17 F | GCGGCAGCAGCAGCGGGGGCTGCGGGCGGTCGGGGCTCCGGGCCGGG-3′ |
| PABPN1 R | 5′-TAAGGGGAATACCATGATG-3′ |
Fig.1Production and purification of GST-A20 construct and generation of polyclonal antibody. A) Coomassie stained gel of bacterial lysates showing presence of the 26 kDa recombinant GST-A20 construct after inducing expression with IPTG for the indicated number of hours. B) Affinity purification of the GST-A20 construct by fractionation over glutathione sepharose resin and subsequent elution with reduced glutathione. The 26 kDa construct was detected in flow-through (FT) and the wash (W) and the majority was eluted in Fractions 4 and 5. C) Immunoblot of 50 μg of lysates from HEK 293 cells transfected with empty plasmid (Ctrl) or plasmid encoding wild type (A10) and alanine-expanded (A17) PABPN1 probed with sera from immunized rabbits. PABPN1 protein was detected as a 50 kDa band as indicated [19].
Fig.2Specificity of the α-alanine antibody. A) Immunoblot of lysates from HEK 293 cells transfected with empty plasmid (Ctrl) or plasmid encoding His-tagged wild type (A10) PABPN1 or PABPN1 expanded to 13–17 alanines probed with the α-Alanine antibody. Blots were probed with α-His to confirm expression of recombinant protein and α-PABPN1 to detect PABPN1 protein. An α-Tubulin antibody was used to detect tubulin as a loading control. B) Immunoblot of lysates from untransfected HEK 293 cells (Ctrl) or HEK 293 cells transfected with pTL-1 plasmid encoding HA-tagged wild type (A17) RUNX2 or alanine-expanded (A27) RUNX2 probed with the α-Alanine antibody. Blots were probed with α-HA to confirm protein expression and α-HSP90 was used to detect HSP90 as a loading control.
Fig.3Sensitivity of the α-alanine antibody. Immunoblots of serial dilutions of lysates from HEK 293 cells transfected with plasmid encoding A17-PABPN1 probed with α-Alanine antibody. The total amount of lysate ( μg protein) loaded in each lane is indicated below the immunoblot panels. Blots were probed with α-PABPN1 to detect endogenous and recombinant PABPN1 protein and α-Tubulin was used to detect tubulin as a loading control.
Fig.4Use of the α-alanine antibody in a transgenic mouse model of OPMD. A) Immunoblots of whole muscle lysate from mice expressing transgenic wild type (A10.1) or alanine-expanded PABPN1 (A17.1) were probed with α-Alanine antibody. Samples were also probed with α-PABPN1 and α-HSP90 as controls. B) Immunostaining of tibialis anterior muscle sections from A10.1 and A17.1 animals stained with α-Alanine antibody. Immunostaining with α-PABPN1 was used to confirm the presence of PABPN1 protein in A10.1 animals and DAPI was used to stain nuclei. Merge image (bottom panels) is included to show co-localization of both A17 and wild type PABPN1 with nuclei. Bar = 5 μm. C) Immunoblots of whole fly lysates from flies expressing muscle-specific A10- or A17-PABPN1 probed with α-Alanine antibody. Samples were also probed with α-PABPN1 to detect PABPN1 and with α-Lamin D to detect lamin D as a loading control.