| Literature DB >> 27857602 |
Junko Kamiguri1, Noriko Tsuchiya1, Ruri Hidema1, Masatoshi Tachibana1, Zenji Yatabe1, Masahiko Shoji2, Chihiro Hashimoto3, Robert Bernard Pansu4, Hideharu Ushiki5.
Abstract
The contraction process of living Vorticella sp. has been investigated by image processing using a high-speed video camera. In order to express the temporal change in the stalk length resulting from the contraction, a damped spring model and a nucleation and growth model are applied. A double exponential is deduced from a conventional damped spring model, while a stretched exponential is newly proposed from a nucleation and growth model. The stretched exponential function is more suitable for the curve fitting and suggests a more particular contraction mechanism in which the contraction of the stalk begins near the cell body and spreads downwards along the stalk. The index value of the stretched exponential is evaluated in the range from 1 to 2 in accordance with the model in which the contraction undergoes through nucleation and growth in a one-dimensional space.Entities:
Keywords: Vorticella sp.; damped mass spring system; high-speed video camera; image processing; nucleation and growth; stretched exponential
Year: 2012 PMID: 27857602 PMCID: PMC5070450 DOI: 10.2142/biophysics.8.1
Source DB: PubMed Journal: Biophysics (Nagoya-shi) ISSN: 1349-2942
Figure 1.Living Vorticella sp. attached to a glass tube.
Figure 2.Schematic image of the contraction of Vorticella sp.
Figure 3.Time series of the contraction of Vorticella sp. (a) and the space coordinates of the turning points of the stalk (b).
Figure 4.Plots of X position of the turning points along the stalk as a function of time. The values of the X position are evaluated in a coordinate system of Figure 3(b).
Figure 5.Time series of L(t) on the contraction process of Vorticella sp.
Figure 6.Time courses of L(t) (a) and thecontraction speed (b). The speed data is smoothed by the Savitzky-Golay seven-point filtering.
Figure 7.Plots of L(t) as a function of time for several Vorticella sp. The solid black line is a fit to a double exponential function (Eq. (4)) and the gray line means the second term of Eq. (4).
Fitting parameters of a double exponential function (Eq. (4))
| Data | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| 1 | −1.39×102 | 7.41×10−1 | 4.24×10−1 | 1.17 | 3.98×102 | 1.7×10−5 | 4.37×10−1 | 1.85×10−4 | 5.68 |
| 2 | −6.27×10 | 9.34×10−1 | 4.36×10−1 | 0.00 | 4.57×102 | 2.1×10−4 | 3.59×10−1 | 1.57×10−4 | 7.53 |
| 3 | −7.98×10 | 8.97×10−1 | 4.26×10−1 | 1.00 | 3.98×102 | 1.4×10−4 | 3.61×10−1 | 1.54×10−4 | 6.11 |
| 4 | −4.08×10 | 1.17 | 5.18×10−1 | 1.33 | 3.81×102 | 1.7×10−4 | 2.84×10−1 | 1.47×10−4 | 6.33 |
| 5 | −4.34×10 | 1.01 | 4.35×10−1 | 1.67 | 3.88×102 | 9.3×10−5 | 3.45×10−1 | 1.50×10−4 | 6.17 |
| 6 | −4.88×10 | 1.01 | 3.91×10−1 | 1.50 | 3.82×102 | 2.2×10−4 | 3.50×10−1 | 1.37×10−4 | 5.41 |
| 7 | −3.61×10 | 1.18 | 4.71×10−1 | 1.00 | 3.35×102 | 6.3×10−5 | 2.96×10−1 | 1.39×10−4 | 5.07 |
| 8 | −2.52×10 | 1.08 | 3.50×10−1 | 1.67 | 3.31×102 | 1.0×10−4 | 3.17×10−1 | 1.11×10−4 | 4.27 |
Figure 8.Plots of L(t) as a function of time for several Vorticella sp. The solid line is a fit to a stretched exponential function (Eq. (8)).
Fitting parameters of a stretched exponential function (Eq. (8))
| Data | ||||||
|---|---|---|---|---|---|---|
| 1 | 2.54×102 | 1.54 | 1.12 | 3.82 | 2.2×10−5 | 5.00 |
| 2 | 3.45×102 | 1.64 | −8.85×10−3 | 4.95 | 7.8×10?6 | 5.36 |
| 3 | 3.05×102 | 1.71 | 9.17×10−1 | 4.76 | 1.3×10−5 | 5.02 |
| 4 | 3.28×102 | 1.49 | 1.31 | 4.84 | 4.9×10−6 | 5.04 |
| 5 | 3.40×102 | 1.41 | 1.46 | 5.04 | 6.4×10−6 | 4.97 |
| 6 | 3.24×102 | 1.61 | 1.34 | 5.73 | 1.0×10−5 | 4.31 |
| 7 | 2.94×102 | 1.38 | 8.90×10−1 | 5.49 | 7.5×10−6 | 3.93 |
| 8 | 3.01×102 | 1.39 | 1.41 | 6.67 | 7.7×10−6 | 3.32 |
Figure 9.χ2-maps for a double exponential function (Eq. (4)) (a) and a stretched exponential function (Eq. (8)) (b).
Figure 10.Schematic image of the contraction mechanism of Vorticella sp. based on the nucleation and growth model