Literature DB >> 2785571

The HLA-DRw8 lineage was generated by a deletion in the DR B region followed by first domain diversification.

J Gorski1.   

Abstract

Sequences were generated for the first, second, and 3'UT regions of DRw8 beta-chain genes from two cell lines differing in their T cell determined allospecificities. Both have second domain sequences homologous to the B1 locus of the DRw52 family (DR3, DR5, and DRw6) and not the B3 locus. However, the 3'UT sequence is homologous to the 3'UT region of the B3 locus of the DRw52 family, and not the B1 locus. The first domain sequences are B1-like as opposed to B3-like and show polymorphism in the region encoding the putative alpha-helical region of the DR beta-chain. The easiest interpretation is that the DRw8 haplotypes constitute a sublineage within the DRw52 group and that this lineage has arisen by a small chromosomal deletion of the region between the B1 locus and the B3 locus. This deletion included the 3'UT region of the B1 locus, the B2 pseudogene, and the 5' end of the B3 locus including the exons encoding the first and second domains. After the deletion, two changes in the first domain arose by a mutational mechanism, possibly gene conversion. One of these changes parallels one seen in the DRw11 lineage.

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Year:  1989        PMID: 2785571

Source DB:  PubMed          Journal:  J Immunol        ISSN: 0022-1767            Impact factor:   5.422


  16 in total

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Authors:  E Kendall; J A Todd; R D Campbell
Journal:  Immunogenetics       Date:  1991       Impact factor: 2.846

2.  Nomenclature for factors of the HLA system, 1990. The WHO Nomenclature Committee for factors of the HLA system.

Authors: 
Journal:  Immunogenetics       Date:  1991       Impact factor: 2.846

3.  HLA-DP/DR interaction in children with juvenile rheumatoid arthritis.

Authors:  C Van Kerckhove; L Luyrink; M S Elma; W P Maksymowych; J E Levinson; M G Larson; E Choi; D N Glass
Journal:  Immunogenetics       Date:  1990       Impact factor: 2.846

4.  Evolutionary relationship between human major histocompatibility complex HLA-DR haplotypes.

Authors:  A C Svensson; N Setterblad; U Pihlgren; L Rask; G Andersson
Journal:  Immunogenetics       Date:  1996       Impact factor: 2.846

5.  Significant variation between SNP-based HLA imputations in diverse populations: the last mile is the hardest.

Authors:  D J Pappas; A Lizee; V Paunic; K R Beutner; A Motyer; D Vukcevic; S Leslie; J Biesiada; J Meller; K D Taylor; X Zheng; L P Zhao; P-A Gourraud; J A Hollenbach; S J Mack; M Maiers
Journal:  Pharmacogenomics J       Date:  2017-04-25       Impact factor: 3.550

6.  Trans-species evolution of Mhc-DRB haplotype polymorphism in primates: organization of DRB genes in the chimpanzee.

Authors:  U Brändle; H Ono; V Vincek; D Klein; M Golubic; B Grahovac; J Klein
Journal:  Immunogenetics       Date:  1992       Impact factor: 2.846

7.  Primate DRB genes from the DR3 and DR8 haplotypes contain ERV9 LTR elements at identical positions.

Authors:  A C Svensson; N Setterblad; S Sigurdardóttir; L Rask; G Andersson
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8.  The evolutionary origin of the HLA-DR3 haplotype.

Authors:  V Vincek; D Klein; F Figueroa; V Hauptfeld; M Kasahara; C O'hUigin; B Mach; J Klein
Journal:  Immunogenetics       Date:  1992       Impact factor: 2.846

9.  Primate DRB6 pseudogenes: clue to the evolutionary origin of the HLA-DR2 haplotype.

Authors:  F Figueroa; C O'hUigin; H Inoki; J Klein
Journal:  Immunogenetics       Date:  1991       Impact factor: 2.846

10.  Alleles at four HLA class II loci determined by oligonucleotide hybridization and their associations in five ethnic groups.

Authors:  M A Fernandez-Viña; X J Gao; M E Moraes; J R Moraes; I Salatiel; S Miller; J Tsai; Y P Sun; J B An; Z Layrisse
Journal:  Immunogenetics       Date:  1991       Impact factor: 2.846

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