Literature DB >> 27846615

Comprehensive translocation and clonality detection in lymphoproliferative disorders by next-generation sequencing.

Dörte Wren1, Brian A Walker1,2, Monika Brüggemann3, Mark A Catherwood4, Christiane Pott3, Kostas Stamatopoulos5, Anton W Langerak6, David Gonzalez7,8.   

Abstract

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Year:  2016        PMID： 27846615      PMCID： PMC5286955          DOI： 10.3324/haematol.2016.155424

Source DB:  PubMed          Journal:  Haematologica        ISSN： 0390-6078            Impact factor:   9.941


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  14 in total

1.  Significantly improved PCR-based clonality testing in B-cell malignancies by use of multiple immunoglobulin gene targets. Report of the BIOMED-2 Concerted Action BHM4-CT98-3936.

Authors:  P A S Evans; Ch Pott; P J T A Groenen; G Salles; F Davi; F Berger; J F Garcia; J H J M van Krieken; S Pals; Ph Kluin; E Schuuring; M Spaargaren; E Boone; D González; B Martinez; R Villuendas; P Gameiro; T C Diss; K Mills; G J Morgan; G I Carter; B J Milner; D Pearson; M Hummel; W Jung; M Ott; D Canioni; K Beldjord; C Bastard; M H Delfau-Larue; J J M van Dongen; T J Molina; J Cabeçadas
Journal:  Leukemia       Date:  2006-12-14       Impact factor: 11.528

2.  Powerful strategy for polymerase chain reaction-based clonality assessment in T-cell malignancies Report of the BIOMED-2 Concerted Action BHM4 CT98-3936.

Authors:  M Brüggemann; H White; P Gaulard; R Garcia-Sanz; P Gameiro; S Oeschger; B Jasani; M Ott; G Delsol; A Orfao; M Tiemann; H Herbst; A W Langerak; M Spaargaren; E Moreau; P J T A Groenen; C Sambade; L Foroni; G I Carter; M Hummel; C Bastard; F Davi; M-H Delfau-Larue; M Kneba; J J M van Dongen; K Beldjord; T J Molina
Journal:  Leukemia       Date:  2006-12-14       Impact factor: 11.528

Review 3.  Standardized MRD quantification in European ALL trials: proceedings of the Second International Symposium on MRD assessment in Kiel, Germany, 18-20 September 2008.

Authors:  M Brüggemann; A Schrauder; T Raff; H Pfeifer; M Dworzak; O G Ottmann; V Asnafi; A Baruchel; R Bassan; Y Benoit; A Biondi; H Cavé; H Dombret; A K Fielding; R Foà; N Gökbuget; A H Goldstone; N Goulden; G Henze; D Hoelzer; G E Janka-Schaub; E A Macintyre; R Pieters; A Rambaldi; J-M Ribera; K Schmiegelow; O Spinelli; J Stary; A von Stackelberg; M Kneba; M Schrappe; J J M van Dongen
Journal:  Leukemia       Date:  2009-12-24       Impact factor: 11.528

Review 4.  Immunogenetic studies of chronic lymphocytic leukemia: revelations and speculations about ontogeny and clinical evolution.

Authors:  Anna Vardi; Andreas Agathangelidis; Lesley-Ann Sutton; Paolo Ghia; Richard Rosenquist; Kostas Stamatopoulos
Journal:  Cancer Res       Date:  2014-07-29       Impact factor: 12.701

5.  Targeted sequencing by proximity ligation for comprehensive variant detection and local haplotyping.

Authors:  Paula J P de Vree; Elzo de Wit; Mehmet Yilmaz; Monique van de Heijning; Petra Klous; Marjon J A M Verstegen; Yi Wan; Hans Teunissen; Peter H L Krijger; Geert Geeven; Paul P Eijk; Daoud Sie; Bauke Ylstra; Lorette O M Hulsman; Marieke F van Dooren; Laura J C M van Zutven; Ans van den Ouweland; Sjef Verbeek; Ko Willems van Dijk; Marion Cornelissen; Atze T Das; Ben Berkhout; Birgit Sikkema-Raddatz; Eva van den Berg; Pieter van der Vlies; Desiree Weening; Johan T den Dunnen; Magdalena Matusiak; Mohamed Lamkanfi; Marjolijn J L Ligtenberg; Petra ter Brugge; Jos Jonkers; John A Foekens; John W Martens; Rob van der Luijt; Hans Kristian Ploos van Amstel; Max van Min; Erik Splinter; Wouter de Laat
Journal:  Nat Biotechnol       Date:  2014-08-17       Impact factor: 54.908

6.  Translocations activating IRF4 identify a subtype of germinal center-derived B-cell lymphoma affecting predominantly children and young adults.

Authors:  Itziar Salaverria; Claudia Philipp; Ilske Oschlies; Christian W Kohler; Markus Kreuz; Monika Szczepanowski; Birgit Burkhardt; Heiko Trautmann; Stefan Gesk; Miroslaw Andrusiewicz; Hilmar Berger; Miriam Fey; Lana Harder; Dirk Hasenclever; Michael Hummel; Markus Loeffler; Friederike Mahn; Idoia Martin-Guerrero; Shoji Pellissery; Christiane Pott; Michael Pfreundschuh; Alfred Reiter; Julia Richter; Maciej Rosolowski; Carsten Schwaenen; Harald Stein; Lorenz Trümper; Swen Wessendorf; Rainer Spang; Ralf Küppers; Wolfram Klapper; Reiner Siebert
Journal:  Blood       Date:  2011-04-12       Impact factor: 22.113

7.  Disruption of the BCL11B gene through inv(14)(q11.2q32.31) results in the expression of BCL11B-TRDC fusion transcripts and is associated with the absence of wild-type BCL11B transcripts in T-ALL.

Authors:  G K Przybylski; W A Dik; J Wanzeck; P Grabarczyk; S Majunke; J I Martin-Subero; R Siebert; G Dölken; W-D Ludwig; B Verhaaf; J J M van Dongen; C A Schmidt; A W Langerak
Journal:  Leukemia       Date:  2005-02       Impact factor: 11.528

8.  A capture-sequencing strategy identifies IRF8, EBF1, and APRIL as novel IGH fusion partners in B-cell lymphoma.

Authors:  Hakim Bouamar; Saman Abbas; An-Ping Lin; Long Wang; Daifeng Jiang; Kenneth N Holder; Marsha C Kinney; Scott Hunicke-Smith; Ricardo C T Aguiar
Journal:  Blood       Date:  2013-06-17       Impact factor: 22.113

9.  Incidence and clinicobiologic characteristics of leukemic B-cell chronic lymphoproliferative disorders with more than one B-cell clone.

Authors:  Maria-Luz Sanchez; Julia Almeida; David Gonzalez; Marcos Gonzalez; Maria-Antonia Garcia-Marcos; Ana Balanzategui; Maria-Consuelo Lopez-Berges; Josep Nomdedeu; Teresa Vallespi; Marcos Barbon; Alejandro Martin; Pilar de la Fuente; Guillermo Martin-Nuñez; Javier Fernandez-Calvo; Jesus-Maria Hernandez; Jesus F San Miguel; Alberto Orfao
Journal:  Blood       Date:  2003-06-26       Impact factor: 22.113

10.  Mutational Spectrum, Copy Number Changes, and Outcome: Results of a Sequencing Study of Patients With Newly Diagnosed Myeloma.

Authors:  Brian A Walker; Eileen M Boyle; Christopher P Wardell; Alex Murison; Dil B Begum; Nasrin M Dahir; Paula Z Proszek; David C Johnson; Martin F Kaiser; Lorenzo Melchor; Lauren I Aronson; Matthew Scales; Charlotte Pawlyn; Fabio Mirabella; John R Jones; Annamaria Brioli; Aneta Mikulasova; David A Cairns; Walter M Gregory; Ana Quartilho; Mark T Drayson; Nigel Russell; Gordon Cook; Graham H Jackson; Xavier Leleu; Faith E Davies; Gareth J Morgan
Journal:  J Clin Oncol       Date:  2015-08-17       Impact factor: 44.544
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  10 in total

1.  CCND2 and CCND3 hijack immunoglobulin light-chain enhancers in cyclin D1- mantle cell lymphoma.

Authors:  David Martín-Garcia; Alba Navarro; Rafael Valdés-Mas; Guillem Clot; Jesús Gutiérrez-Abril; Miriam Prieto; Inmaculada Ribera-Cortada; Renata Woroniecka; Grzegorz Rymkiewicz; Susanne Bens; Laurence de Leval; Andreas Rosenwald; Judith A Ferry; Eric D Hsi; Kai Fu; Jan Delabie; Dennis Weisenburger; Daphne de Jong; Fina Climent; Sheila J O'Connor; Steven H Swerdlow; David Torrents; Sergi Beltran; Blanca Espinet; Blanca González-Farré; Luis Veloza; Dolors Costa; Estella Matutes; Reiner Siebert; German Ott; Leticia Quintanilla-Martinez; Elaine S Jaffe; Carlos López-Otín; Itziar Salaverria; Xose S Puente; Elias Campo; Sílvia Beà
Journal:  Blood       Date:  2018-12-11       Impact factor: 22.113

2.  Minimal residual disease in mantle cell lymphoma: are we ready for a personalized treatment approach?

Authors:  Simone Ferrero; Martin Dreyling
Journal:  Haematologica       Date:  2017-07       Impact factor: 9.941

Review 3.  Is Next-Generation Sequencing the way to go for Residual Disease Monitoring in Acute Lymphoblastic Leukemia?

Authors:  Michaela Kotrova; Jan Trka; Michael Kneba; Monika Brüggemann
Journal:  Mol Diagn Ther       Date:  2017-10       Impact factor: 4.074

Review 4.  Does MRD have a role in the management of iNHL?

Authors:  Ilaria Del Giudice; Irene Della Starza; Robin Foà
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2021-12-10

5.  Establishment of Immunoglobulin Heavy (IGH) Chain Clonality Testing by Next-Generation Sequencing for Routine Characterization of B-Cell and Plasma Cell Neoplasms.

Authors:  Maria E Arcila; Wayne Yu; Mustafa Syed; Hannah Kim; Lidia Maciag; JinJuan Yao; Caleb Ho; Kseniya Petrova; Christine Moung; Paulo Salazar; Ivelise Rijo; Tessara Baldi; Ahmet Zehir; Ola Landgren; Jae Park; Mikhail Roshal; Ahmet Dogan; Khedoudja Nafa
Journal:  J Mol Diagn       Date:  2018-12-25       Impact factor: 5.568

Review 6.  MRD-Based Therapeutic Decisions in Genetically Defined Subsets of Adolescents and Young Adult Philadelphia-Negative ALL.

Authors:  Manuela Tosi; Orietta Spinelli; Matteo Leoncin; Roberta Cavagna; Chiara Pavoni; Federico Lussana; Tamara Intermesoli; Luca Frison; Giulia Perali; Francesca Carobolante; Piera Viero; Cristina Skert; Alessandro Rambaldi; Renato Bassan
Journal:  Cancers (Basel)       Date:  2021-04-27       Impact factor: 6.639

7.  A systematic approach for peptide characterization of B-cell receptor in chronic lymphocytic leukemia cells.

Authors:  Paula Díez; Nieves Ibarrola; Rosa M Dégano; Quentin Lécrevisse; Arancha Rodriguez-Caballero; Ignacio Criado; Wendy G Nieto; Rafael Góngora; Marcos González; Julia Almeida; Alberto Orfao; Manuel Fuentes
Journal:  Oncotarget       Date:  2017-06-27

8.  Quality control and quantification in IG/TR next-generation sequencing marker identification: protocols and bioinformatic functionalities by EuroClonality-NGS.

Authors:  Henrik Knecht; Tomas Reigl; Michaela Kotrová; Franziska Appelt; Peter Stewart; Vojtech Bystry; Adam Krejci; Andrea Grioni; Karol Pal; Kamila Stranska; Karla Plevova; Jos Rijntjes; Simona Songia; Michael Svatoň; Eva Froňková; Jack Bartram; Blanca Scheijen; Dietrich Herrmann; Ramón García-Sanz; Jeremy Hancock; John Moppett; Jacques J M van Dongen; Giovanni Cazzaniga; Frédéric Davi; Patricia J T A Groenen; Michael Hummel; Elizabeth A Macintyre; Kostas Stamatopoulos; Jan Trka; Anton W Langerak; David Gonzalez; Christiane Pott; Monika Brüggemann; Nikos Darzentas
Journal:  Leukemia       Date:  2019-06-21       Impact factor: 11.528

9.  High expression of nucleoporin 133 mRNA in bone marrow CD138+ cells is a poor prognostic factor in multiple myeloma.

Authors:  Soushi Ibata; Masayoshi Kobune; Shohei Kikuchi; Masahiro Yoshida; Shogo Miura; Hiroto Horiguchi; Kazuyuki Murase; Satoshi Iyama; Kohichi Takada; Koji Miyanishi; Junji Kato
Journal:  Oncotarget       Date:  2018-05-18

10.  Droplet Digital PCR Quantification of Mantle Cell Lymphoma Follow-up Samples From Four Prospective Trials of the European MCL Network.

Authors:  Daniela Drandi; Marion Alcantara; Ichrafe Benmaad; Arian Söhlbrandt; Ludovic Lhermitte; GianMaria Zaccaria; Martina Ferrante; Elisa Genuardi; Barbara Mantoan; Patrick Villarese; Morgane Cheminant; Irene Della Starza; Elena Ciabatti; Riccardo Bomben; Cristina Jimenez; Mary Callanan; Chrystelle Abdo; Cornelia Eckert; Vincent Ribrag; Sergio Cortelazzo; Martin Dreyling; Olivier Hermine; Marie-Hélène Delfau-Larue; Christiane Pott; Marco Ladetto; Simone Ferrero; Elizabeth Macintyre
Journal:  Hemasphere       Date:  2020-04-03
  10 in total

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