Literature DB >> 27844427

Implementation and Tuning of an Optical Tweezers Force-Clamp Feedback System.

Michael Bugiel1, Anita Jannasch1, Erik Schäffer2.   

Abstract

Feedback systems can be used to control the value of a system variable. In optical tweezers, active feedback is often implemented to either keep the position or tension applied to a single biomolecule constant. Here, we describe the implementation of the latter: an optical force-clamp setup that can be used to study the motion of processive molecular motors under a constant load. We describe the basics of a software-implemented proportional-integral-derivative (PID) controller, how to tune it, and how to determine its optimal feedback rate. Limitations, possible feed-forward applications, and extensions into two- and three-dimensional optical force clamps are discussed. The feedback is ultimately limited by thermal fluctuations and the compliance of the involved molecules. To investigate a particular mechanical process, understanding the basics and limitations of the feedback system will be helpful for choosing the proper feedback hardware, for optimizing the system parameters, and for the design of the experiment.

Keywords:  Force clamp; Force spectroscopy; Kinesin; Optical tweezers; PID controller; PID tuning; Single-molecule biophysics

Mesh:

Year:  2017        PMID: 27844427     DOI: 10.1007/978-1-4939-6421-5_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

1.  Three-Dimensional Optical Tweezers Tracking Resolves Random Sideward Steps of the Kinesin-8 Kip3.

Authors:  Michael Bugiel; Erik Schäffer
Journal:  Biophys J       Date:  2018-10-02       Impact factor: 4.033

2.  Phragmoplast Orienting Kinesin 2 Is a Weak Motor Switching between Processive and Diffusive Modes.

Authors:  Mayank Chugh; Maja Reißner; Michael Bugiel; Elisabeth Lipka; Arvid Herrmann; Basudev Roy; Sabine Müller; Erik Schäffer
Journal:  Biophys J       Date:  2018-07-17       Impact factor: 4.033

3.  The Kinesin-8 Kip3 Depolymerizes Microtubules with a Collective Force-Dependent Mechanism.

Authors:  Michael Bugiel; Mayank Chugh; Tobias Jörg Jachowski; Erik Schäffer; Anita Jannasch
Journal:  Biophys J       Date:  2020-03-14       Impact factor: 4.033

4.  Electro-optic deflectors deliver advantages over acousto-optical deflectors in a high resolution, ultra-fast force-clamp optical trap.

Authors:  Michael S Woody; Marco Capitanio; E Michael Ostap; Yale E Goldman
Journal:  Opt Express       Date:  2018-04-30       Impact factor: 3.894

  4 in total

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