Literature DB >> 27843393

Mitochondrial genotyping of an endangered bitterling Acheilognathus typus (Cyprinidae).

Kenji Saitoh1, Kentaro Shindo2, Yasufumi Fujimoto3, Kiyotaka Takahashi4, Tetsuo Shimada3.   

Abstract

Genotyping of endangered species is helpful for establishing and evaluating conservation strategies. Mitochondrial sequence data was analyzed from 541 individuals of a critically endangered fish, Acheilognathus typus from present-day range-wide localities to re-evaluate an in-progress restoration program around Lake Izunuma-Uchinuma, Miyagi, Japan. Acheilognathus typus showed low sequence diversity with only eight haplotypes and π and ĥ values of 0.59129 and 0.00118 respectively. Genetic data suggests Acheilognathus typus is adapted to pulsed environments and prone to population flush and crash. Genotyping of populations in introduced localities revealed that their source is not from nearby localities.

Entities:  

Keywords:  Bottleneck; Cyprinidae; conservation genetics; fish; heteroplasmy; invasive alien species; restoration

Year:  2016        PMID: 27843393      PMCID: PMC5096401          DOI: 10.3897/zookeys.623.8981

Source DB:  PubMed          Journal:  Zookeys        ISSN: 1313-2970            Impact factor:   1.546


  11 in total

1.  A human population bottleneck can account for the discordance between patterns of mitochondrial versus nuclear DNA variation.

Authors:  J C Fay; C I Wu
Journal:  Mol Biol Evol       Date:  1999-07       Impact factor: 16.240

2.  Considering evolutionary processes in conservation biology.

Authors: 
Journal:  Trends Ecol Evol       Date:  2000-07       Impact factor: 17.712

3.  TCS: a computer program to estimate gene genealogies.

Authors:  M Clement; D Posada; K A Crandall
Journal:  Mol Ecol       Date:  2000-10       Impact factor: 6.185

4.  Nonsynonymous site heteroplasmy in fish mitochondrial DNA.

Authors:  Yuya Shigenobu; Kenji Saitoh; Ken-ichi Hayashizaki; Hitoshi Ida
Journal:  Genes Genet Syst       Date:  2005-08       Impact factor: 1.517

5.  Mitogenomic evolution and interrelationships of the Cypriniformes (Actinopterygii: Ostariophysi): the first evidence toward resolution of higher-level relationships of the world's largest freshwater fish clade based on 59 whole mitogenome sequences.

Authors:  K Saitoh; T Sado; R L Mayden; N Hanzawa; K Nakamura; M Nishida; M Miya
Journal:  J Mol Evol       Date:  2006-11-02       Impact factor: 2.395

6.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

7.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Authors:  F Tajima
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

8.  Life history and reproductive ecology of the endangered Itasenpara bitterling Acheilognathus longipinnis (Cyprinidae) in the Himi region, central Japan.

Authors:  M Nishio; T Kawamoto; R Kawakami; K Edo; Y Yamazaki
Journal:  J Fish Biol       Date:  2015-08-10       Impact factor: 2.051

9.  Mitochondrial gene introgression between spined loaches via hybridogenesis.

Authors:  Kenji Saitoh; Ik-Soo Kim; Eun-Hee Lee
Journal:  Zoolog Sci       Date:  2004-07       Impact factor: 0.931

10.  Phylogenetic relationships of bitterling fishes (Teleostei: Cypriniformes: Acheilognathinae), inferred from mitochondrial cytochrome B sequences.

Authors:  Kouichi Kawamura; Takayoshi Ueda; Ryoichi Arai; Carl Smith
Journal:  Zoolog Sci       Date:  2014-05       Impact factor: 0.931

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  2 in total

1.  Identifying a breeding habitat of a critically endangered fish, Acheilognathus typus, in a natural river in Japan.

Authors:  Masayuki K Sakata; Nobutaka Maki; Hideki Sugiyama; Toshifumi Minamoto
Journal:  Naturwissenschaften       Date:  2017-11-14

2.  The complete mitochondrial genomes of two endangered bitterling Acheilognathus tabira tohokuensis and A. tabira erythropterus (Cyprinidae, Acheilognathinae).

Authors:  Nobuaki Nagata; Jyun-Ichi Kitamura
Journal:  Mitochondrial DNA B Resour       Date:  2019-09-03       Impact factor: 0.658

  2 in total

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