Literature DB >> 27840868

Virtual staining of colon cancer tissue by label-free Raman micro-spectroscopy.

D Petersen1, L Mavarani, D Niedieker, E Freier, A Tannapfel, C Kötting, K Gerwert, S F El-Mashtoly.   

Abstract

The great capability of the label-free classification of tissue via vibrational spectroscopy, like Raman or infrared imaging, is shown in numerous publications (review: Diem et al., J. Biophotonics, 2013, 6, 855-886). Herein, we present a new approach, virtual staining, that improves the Raman spectral histopathology (SHP) images of colorectal cancer tissue by combining the integrated Raman intensity image in the C-H stretching region (2800-3050 cm-1) with the pseudo-colour Raman image. This allows the display of fine structures such as the filamentous composition of muscle tissue. The morphology of the virtually stained images is in agreement with the gold standard in medical diagnosis, the haematoxylin-eosin staining. The virtual staining image also represents the whole biochemical fingerprint, and several tissue components including carcinoma were identified automatically with high sensitivity and specificity. For fast tissue classifications, a similar approach was applied on coherent anti-Stokes Raman scattering (CARS) spectral data that is faster and therefore potentially more suitable for clinical applications.

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Mesh:

Year:  2017        PMID: 27840868     DOI: 10.1039/c6an02072k

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  11 in total

1.  Label-free diagnosis of lung cancer with tissue-slice surface-enhanced Raman spectroscopy and statistical analysis.

Authors:  Kun Zhang; Chunyan Hao; Yanyan Huo; Baoyuan Man; Chao Zhang; Cheng Yang; Mei Liu; Chuansong Chen
Journal:  Lasers Med Sci       Date:  2019-04-13       Impact factor: 3.161

2.  CARS Imaging Advances Early Diagnosis of Cardiac Manifestation of Fabry Disease.

Authors:  Elen Tolstik; Nairveen Ali; Shuxia Guo; Paul Ebersbach; Dorothe Möllmann; Paula Arias-Loza; Johann Dierks; Irina Schuler; Erik Freier; Jörg Debus; Hideo A Baba; Peter Nordbeck; Thomas Bocklitz; Kristina Lorenz
Journal:  Int J Mol Sci       Date:  2022-05-11       Impact factor: 6.208

3.  Molecular profiling of the intestinal mucosa and immune cells of the colon by multi-parametric histological techniques.

Authors:  Łukasz Zadka; Karolina Chrabaszcz; Igor Buzalewicz; Ewelina Wiercigroch; Natalia Glatzel-Plucińska; Łukasz Szleszkowski; Agnieszka Gomułkiewicz; Aleksandra Piotrowska; Krzysztof Kurnol; Piotr Dzięgiel; Tomasz Jurek; Kamilla Malek
Journal:  Sci Rep       Date:  2021-05-28       Impact factor: 4.379

4.  Use of Deep Learning to Develop and Analyze Computational Hematoxylin and Eosin Staining of Prostate Core Biopsy Images for Tumor Diagnosis.

Authors:  Aman Rana; Alarice Lowe; Marie Lithgow; Katharine Horback; Tyler Janovitz; Annacarolina Da Silva; Harrison Tsai; Vignesh Shanmugam; Akram Bayat; Pratik Shah
Journal:  JAMA Netw Open       Date:  2020-05-01

5.  Mid-Infrared Imaging Is Able to Characterize and Separate Cancer Cell Lines.

Authors:  E Kontsek; A Pesti; M Björnstedt; T Üveges; E Szabó; T Garay; P Gordon; S Gergely; A Kiss
Journal:  Pathol Oncol Res       Date:  2020-06-16       Impact factor: 3.201

6.  Raman micro-spectroscopy monitors acquired resistance to targeted cancer therapy at the cellular level.

Authors:  Mohamad K Hammoud; Hesham K Yosef; Tatjana Lechtonen; Karim Aljakouch; Martin Schuler; Wissam Alsaidi; Ibrahim Daho; Abdelouahid Maghnouj; Stephan Hahn; Samir F El-Mashtoly; Klaus Gerwert
Journal:  Sci Rep       Date:  2018-10-15       Impact factor: 4.379

7.  Deep-UV excitation fluorescence microscopy for detection of lymph node metastasis using deep neural network.

Authors:  Tatsuya Matsumoto; Hirohiko Niioka; Yasuaki Kumamoto; Junya Sato; Osamu Inamori; Ryuta Nakao; Yoshinori Harada; Eiichi Konishi; Eigo Otsuji; Hideo Tanaka; Jun Miyake; Tetsuro Takamatsu
Journal:  Sci Rep       Date:  2019-11-15       Impact factor: 4.379

8.  Revealing architectural order with quantitative label-free imaging and deep learning.

Authors:  Syuan-Ming Guo; Li-Hao Yeh; Jenny Folkesson; Ivan E Ivanov; Anitha P Krishnan; Matthew G Keefe; Ezzat Hashemi; David Shin; Bryant B Chhun; Nathan H Cho; Manuel D Leonetti; May H Han; Tomasz J Nowakowski; Shalin B Mehta
Journal:  Elife       Date:  2020-07-27       Impact factor: 8.140

9.  Raman and fluorescence micro-spectroscopy applied for the monitoring of sunitinib-loaded porous silicon nanocontainers in cardiac cells.

Authors:  E Tolstik; M B Gongalsky; J Dierks; T Brand; M Pernecker; N V Pervushin; D E Maksutova; K A Gonchar; J V Samsonova; G Kopeina; V Sivakov; L A Osminkina; K Lorenz
Journal:  Front Pharmacol       Date:  2022-08-09       Impact factor: 5.988

10.  The subcellular arrangement of alpha-synuclein proteoforms in the Parkinson's disease brain as revealed by multicolor STED microscopy.

Authors:  Tim E Moors; Christina A Maat; Daniel Niedieker; Daniel Mona; Dennis Petersen; Evelien Timmermans-Huisman; Jeroen Kole; Samir F El-Mashtoly; Liz Spycher; Wagner Zago; Robin Barbour; Olaf Mundigl; Klaus Kaluza; Sylwia Huber; Melanie N Hug; Thomas Kremer; Mirko Ritter; Sebastian Dziadek; Jeroen J G Geurts; Klaus Gerwert; Markus Britschgi; Wilma D J van de Berg
Journal:  Acta Neuropathol       Date:  2021-06-11       Impact factor: 17.088

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