Literature DB >> 27840561

Solvent, pH, and Ionic Effects on the Binding of Single-Stranded DNA by Circular Oligodeoxynucleotides.

David J D'Souza1, Eric T Kool1.   

Abstract

The effects of changing solution conditions on the strength of triple helical complexes formed between pyrimidine-rich circular DNA oligonucleotides and their homopurine complements are examined. The complexes display properties different from those seen for other types of DNA triplexes.

Entities:  

Year:  1994        PMID: 27840561      PMCID: PMC5102505          DOI: 10.1016/S0960-894X(01)80664-8

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  25 in total

1.  Strong binding of single-stranded DNA by stem-loop oligonucleotides.

Authors:  D J D'Souza; E T Kool
Journal:  J Biomol Struct Dyn       Date:  1992-08

2.  COMPLEX FORMATION BETWEEN POLYCYTIDYLIC ACID AND GUANINE OLIGONUCLEOTIDES.

Authors:  M N LIPSETT
Journal:  J Biol Chem       Date:  1964-04       Impact factor: 5.157

Review 3.  The physical and chemical properties of nucleic acids.

Authors:  G Felsenfeld; H T Miles
Journal:  Annu Rev Biochem       Date:  1967       Impact factor: 23.643

4.  On the stability of nucleic acid structures in solution: enthalpy-entropy compensations, internal rotations and reversibility.

Authors:  M S Searle; D H Williams
Journal:  Nucleic Acids Res       Date:  1993-05-11       Impact factor: 16.971

5.  Melting behavior of a covalently closed, single-stranded, circular DNA.

Authors:  D A Erie; R A Jones; W K Olson; N K Sinha; K J Breslauer
Journal:  Biochemistry       Date:  1989-01-10       Impact factor: 3.162

6.  Enzymic joining of polynucleotides. IV. Formation of a circular deoxyadenylate-deoxythymidylate copolymer.

Authors:  B M Olivera; I E Scheffler; I R Lehman
Journal:  J Mol Biol       Date:  1968-09-14       Impact factor: 5.469

7.  A direct demonstration that the ethanol-induced transition of DNA is between the A and B forms: an X-ray diffraction study.

Authors:  S B Zimmerman; B H Pheiffer
Journal:  J Mol Biol       Date:  1979-12-25       Impact factor: 5.469

8.  Preparation and melting of single strand circular DNA loops.

Authors:  D E Wemmer; A S Benight
Journal:  Nucleic Acids Res       Date:  1985-12-09       Impact factor: 16.971

9.  Crosslinking transcription factors to their recognition sequences with PtII complexes.

Authors:  B C Chu; L E Orgel
Journal:  Nucleic Acids Res       Date:  1992-05-25       Impact factor: 16.971

10.  Synthesis of cyclic oligonucleotides by a modified phosphotriester approach.

Authors:  E de Vroom; H J Broxterman; L A Sliedregt; G A van der Marel; J H van Boom
Journal:  Nucleic Acids Res       Date:  1988-05-25       Impact factor: 16.971

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  3 in total

1.  Topologically Modified Biopolymers: Properties of Synthetic Circular DNAs and RNAs.

Authors:  Eric T Kool
Journal:  Trends Polym Sci       Date:  1995-12

2.  Preliminary evidences of the presence of extracellular DNA single stranded forms in soil.

Authors:  Shamina Imran Pathan; Paola Arfaioli; Maria Teresa Ceccherini; Judith Ascher-Jenull; Giacomo Pietramellara
Journal:  PLoS One       Date:  2020-01-07       Impact factor: 3.240

3.  Chloride Enhances DNA Reactivity with Chlorine under Conditions Relevant to Water Treatment.

Authors:  Aleksandra Szczuka; Jordon Horton; Kelsey J Evans; Vincent T DiPietri; John D Sivey; Krista R Wigginton
Journal:  Environ Sci Technol       Date:  2022-08-26       Impact factor: 11.357

  3 in total

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