Literature DB >> 2782873

Estimation of microbial densities from dilution count experiments.

C N Haas1.   

Abstract

Although dilution counts have been widely used in quantitative microbiology, their interpretation has always been widely discussed both in microbiology and in applied statistics. Maximum-likelihood (most-probable-number) methods hae generally been used to estimate densities from dilution experiments. It has not been widely recognized that these methods are intrinsically and statistically biased at the sample sizes used in microbiology. This paper presents an analysis of proposed method for correction of such biases, and the method was found to be robust for moderate deviations from Poisson behavior. For analyses at greater variance with the Poisson assumptions, the use of the Spearman-Karber method is analyzed and shown to yield an estimate of density of lesser bias than that produced by the most-probable-number method. Revised methods of constructing confidence limits proposed by Loyer and Hamilton (M.W. Loyer and M.A. Hamilton, Biometrics 40:907-916, 1984) are also discussed, and charts for the three- and four-decimal dilution series with five tubes per dilution are presented.

Mesh:

Year:  1989        PMID: 2782873      PMCID: PMC202983          DOI: 10.1128/aem.55.8.1934-1942.1989

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  8 in total

1.  Estimation of coliform density by the membrane filter and the fermentation tube methods.

Authors:  H A THOMAS; R L WOODWARD
Journal:  Am J Public Health Nations Health       Date:  1955-11

2.  Limitations of the zero method of population counts.

Authors:  F M WADLEY
Journal:  Science       Date:  1954-05-14       Impact factor: 47.728

3.  STATISTICAL METHODS AND CONTROL IN BACTERIOLOGY.

Authors:  C Eisenhart; P W Wilson
Journal:  Bacteriol Rev       Date:  1943-06

4.  Bacterial density in water determined by poisson or negative binomial distributions.

Authors:  A H El-Shaarawi; S R Esterby; B J Dutka
Journal:  Appl Environ Microbiol       Date:  1981-01       Impact factor: 4.792

5.  Estimates of the LD50; a critique.

Authors:  I BROSS
Journal:  Biometrics       Date:  1950-12       Impact factor: 2.571

6.  Estimation of bacterial densities by means of the "most probable number".

Authors:  W G COCHRAN
Journal:  Biometrics       Date:  1950-06       Impact factor: 2.571

7.  Test of the validity of the Poisson assumption for analysis of most-probable-number results.

Authors:  C N Haas; B Heller
Journal:  Appl Environ Microbiol       Date:  1988-12       Impact factor: 4.792

8.  Interval estimation of the density of organisms using a serial-dilution experiment.

Authors:  M W Loyer; M A Hamilton
Journal:  Biometrics       Date:  1984-12       Impact factor: 2.571

  8 in total
  3 in total

1.  Viability and isolation of marine bacteria by dilution culture: theory, procedures, and initial results.

Authors:  D K Button; F Schut; P Quang; R Martin; B R Robertson
Journal:  Appl Environ Microbiol       Date:  1993-03       Impact factor: 4.792

2.  A most-probable-number assay for enumeration of infectious Cryptosporidium parvum oocysts.

Authors:  T R Slifko; D E Huffman; J B Rose
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

3.  When is a microbial culture "pure"? Persistent cryptic contaminant escapes detection even with deep genome sequencing.

Authors:  Pravin Malla Shrestha; Kelly P Nevin; Minita Shrestha; Derek R Lovley
Journal:  MBio       Date:  2013-03-12       Impact factor: 7.867

  3 in total

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