Literature DB >> 27828174

Image resolution and deconvolution in optical tomography.

Jelle van der Horst, Jeroen Kalkman.   

Abstract

We present a frequency domain analysis of the image resolution of optical tomography systems. The result of our analysis is a description of the spatially-variant resolution in optical tomographic image after reconstruction as a function of the properties of the imaging system geometry. We validate our model using optical projection tomography (OPT) measurements of fluorescent beads embedded in agarose gel. Our model correctly describes both the radial and tangential resolution of the measured images. In addition, we present a correction of the tomographic images for the spatially-varying resolution using a deconvolution algorithm. The resulting corrected tomographic reconstruction shows a homogeneous and isotropic pixel-limited resolution across the entire image. Our method is applied to OPT measurements of a zebrafish, showing improved resolution. Aside from allowing image correction and providing a resolution measure for OPT systems, our model provides a powerful tool for the design of optical tomographic systems.

Entities:  

Year:  2016        PMID: 27828174     DOI: 10.1364/OE.24.024460

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  5 in total

1.  High resolution optical projection tomography platform for multispectral imaging of the mouse gut.

Authors:  Cédric Schmidt; Arielle L Planchette; David Nguyen; Gabriel Giardina; Yoan Neuenschwander; Mathieu Di Franco; Alessio Mylonas; Adrien C Descloux; Enrico Pomarico; Aleksandra Radenovic; Jérôme Extermann
Journal:  Biomed Opt Express       Date:  2021-05-26       Impact factor: 3.732

2.  Direct inversion algorithm for focal plane scanning optical projection tomography.

Authors:  Kevin G Chan; Michael Liebling
Journal:  Biomed Opt Express       Date:  2017-10-31       Impact factor: 3.732

3.  Three-dimensional bright-field microscopy with isotropic resolution based on multi-view acquisition and image fusion reconstruction.

Authors:  Gianmaria Calisesi; Alessia Candeo; Andrea Farina; Cosimo D'Andrea; Vittorio Magni; Gianluca Valentini; Anna Pistocchi; Alex Costa; Andrea Bassi
Journal:  Sci Rep       Date:  2020-07-29       Impact factor: 4.379

4.  Gaussian Light Model in Brightfield Optical Projection Tomography.

Authors:  Olli Koskela; Toni Montonen; Birhanu Belay; Edite Figueiras; Sampsa Pursiainen; Jari Hyttinen
Journal:  Sci Rep       Date:  2019-09-26       Impact factor: 4.379

5.  Deconvolution for multimode fiber imaging: modeling of spatially variant PSF.

Authors:  Raphaël Turcotte; Eusebiu Sutu; Carla C Schmidt; Nigel J Emptage; Martin J Booth
Journal:  Biomed Opt Express       Date:  2020-07-29       Impact factor: 3.732

  5 in total

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