| Literature DB >> 27827861 |
Rohit H Budhraja1, Milin A Shah2, Mahendra Suthar3, Arun Yadav4, Sahil P Shah5, Prashant Kale6,7, Parisa Asvadi8, Mariadhas Valan Arasu9, Naif Abdullah Al-Dhabi10, Chun Geon Park11, Young-Ock Kim12, Hak Jae Kim13, Y K Agrawal14, Ravi K Krovidi15.
Abstract
Quantitative targeted proteomics based approaches deploy state-of-the-art Liquid chromatography tandem mass spectrometry LC-MS technologies and are evolving as a complementary technique to standard ligand-binding based assays. Advancements in MS technology, which have augmented the specificity, selectivity and sensitivity limits of detection and freedom from antibody generation, have made it amicable towards various clinical applications. In our current work, a surrogate peptide based quantitative proteomics assessment is performed by selecting specific signature peptides from the complementary determining region CDR region of trastuzumab (Herclon®, Roche products in India). We developed a double Stable Isotope Label (dSIL) approach by using two different surrogate peptides to evaluate the proteolytic digestion efficiency and accurate quantification of the target analyte peptide of Herclon® in human serum. Method validation experiments were meticulously performed as per bioanalytical method validation guidelines. The dSIL approach, using an LC-MS/MS based quantification assay demonstrated good linearity over a range of 5-500 µg/mL of Herclon®, and validation experimental data is in compliance with bioanalytical regulatory guidelines.Entities:
Keywords: LC-MS/MS; dSIL; pharmacokinetics; trastuzumab
Mesh:
Substances:
Year: 2016 PMID: 27827861 PMCID: PMC6274275 DOI: 10.3390/molecules21111464
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Table represents the quantification data of trastuzumab signature peptide (IYPTNGYTR) in human serum batch; calibration curve (CC) extends from 5 µg/mL to 500 µg/mL; their corresponding accuracy percentage and R2 = 0.99 was observed.
| Sample Name (CC) | Analyte Peak Area | Analyte Retention Time (RT) (min) | Internal Standard (IS) Peak Area | IS RT (min) | Area Ratio | Analyte Conc (µg/mL) | Calculated Conc (µg/mL) | Accuracy (%) |
|---|---|---|---|---|---|---|---|---|
| STD_8 | 2201571 | 4.476 | 1269609 | 4.471 | 1.734 | 501.6 | 526.911 | 105 |
| STD_7 | 1764292 | 4.563 | 1184001 | 4.557 | 1.49 | 451.44 | 452.73 | 100.3 |
| STD_6 | 1523150 | 4.528 | 1249879 | 4.523 | 1.219 | 375.598 | 370.177 | 98.6 |
| STD_5 | 1075654 | 4.46 | 1216198 | 4.456 | 0.884 | 251.651 | 268.549 | 106.7 |
| STD_4 | 289982 | 4.537 | 1226623 | 4.534 | 0.236 | 75.495 | 71.487 | 94.7 |
| STD_3 | 101021 | 4.534 | 1244545 | 4.531 | 0.081 | 25.668 | 24.281 | 94.6 |
| STD_2 | 44585 | 4.514 | 1299658 | 4.511 | 0.034 | 10.267 | 10.029 | 97.7 |
| STD_1 | 23549 | 4.501 | 1264843 | 4.5 | 0.019 | 5.134 | 5.259 | 102.4 |
Quantification data of trastuzumab signature peptide (FTISADTSK) in human serum batch; calibration curve (CC) extends from 5 µg/mL to 500 µg/mL; their corresponding accuracy percentage and R2 = 0.99 was observed.
| Sample Name (CC) | Analyte Peak Area | Analyte RT (min) | IS Peak Area | IS Retention Time (min) | Area Ratio | Analyte Conc (µg/mL) | Calculated Conc (µg/mL) | Accuracy (%) |
|---|---|---|---|---|---|---|---|---|
| STD_8 | 2826503 | 6.058 | 513894 | 6.056 | 5.500 | 501.600 | 495.319 | 98.7 |
| STD_7 | 2668953 | 6.077 | 554130 | 6.075 | 4.816 | 451.440 | 433.648 | 96.1 |
| STD_6 | 2174781 | 6.051 | 526182 | 6.048 | 4.133 | 375.598 | 372.009 | 99.0 |
| STD_5 | 1201036 | 6.075 | 436818 | 6.074 | 2.750 | 251.651 | 247.200 | 98.2 |
| STD_4 | 432522 | 6.081 | 506952 | 6.079 | 0.853 | 75.495 | 76.145 | 100.9 |
| STD_3 | 251462 | 6.140 | 908537 | 6.139 | 0.277 | 25.668 | 24.152 | 94.1 |
| STD_2 | 69119 | 6.123 | 521644 | 6.120 | 0.133 | 10.267 | 11.138 | 108.5 |
| STD_1 | 44541 | 6.118 | 623461 | 6.116 | 0.071 | 5.134 | 5.630 | 109.7 |
Precision and accuracy of LC-MS/MS method.
| Parameters | Lower-Limit of Quantitation (LOQ QC) | Low-Quality Control (LQC) | Medium Quality Control (MQC) | High Quality Control (HQC) |
|---|---|---|---|---|
| Calculated concentration (µg/mL) | 5.416 | 16.237 | 223.708 | 397.879 |
| 5.421 | 16.366 | 252.093 | 462.144 | |
| 5.374 | 13.4 | 216.874 | 409.452 | |
| 4.857 | 15.199 | 264.181 | 449.311 | |
| 5.569 | 13.163 | 269.631 | 400.535 | |
| 5.94 | 16.551 | 229.291 | 356.099 | |
| Mean | 5.4295 | 15.1527 | 242.6297 | 412.5700 |
| Standard deviation (SD±) | 0.34962 | 1.52552 | 22.28179 | 38.38449 |
| Precision (CV%) | 6.4 | 10.1 | 9.2 | 9.3 |
| Nominal value (µg/mL) | 5.326 | 15.218 | 249.480 | 396.000 |
| Accuracy% | 101.9 | 99.6 | 97.3 | 104.2 |
| Number of samples (N) | 6 | 6 | 6 | 6 |
Stability data of trastuzumab signature peptide (IYPTNGYTR) after 6 h incubation at 4 °C in human serum batch. Mean ratio; 100.2% and 107.9% and % change; −5.9 and 13.9 was observed at HQC and LQC level, respectively. Here, n represents the number of samples analyzed for the stability experiment. (Acceptance criteria: %Change ≤15%; %Mean ratio 90%–110%, %CV ≤20%).
| Parameters | Freshly Injected | After 6.0 h | ||
|---|---|---|---|---|
| HQC (µg/mL) | LQC (µg/mL) | HQC (µg/mL) | LQC (µg/mL) | |
| 371.105 | 16.441 | 348.739 | 18.068 | |
| 388.888 | 15.735 | 337.011 | 17.899 | |
| 383.461 | 12.462 | 378.322 | 16.052 | |
| 337.262 | 18.304 | 391.093 | 17.159 | |
| 381.139 | 15.744 | 414.900 | 17.195 | |
| 369.525 | 16.588 | 365.539 | 16.448 | |
| 371.8967 | 15.8790 | 372.6007 | 17.1368 | |
| 18.51309 | 1.91906 | 28.45981 | 0.78781 | |
| 5.0 | 12.1 | 7.6 | 4.6 | |
| 396 | 15.144 | 396 | 15.144 | |
| 6 | 6 | 6 | 6 | |
| % Change | −5.9 | 13.2 | ||
| % of Mean ratios | 100.2 | 107.9 | ||
Table demonstrates the stability data of trastuzumab signature peptide (IYPTNGYTR) after four freeze-thaw cycles of the human serum batch. Mean ratio; 100.0% and 104.0%and %change; −6.1 and 9.1 was observed at HQC and LQC level, respectively. Here, n represents the number of sample analyzed for the stability experiment. (Acceptance criteria: %Change ≤15%; % Mean ratio 90%–110%, %CV ≤20%).
| Parameters | Freshly Injected | After 4 FT CYCLE | ||
|---|---|---|---|---|
| HQC (µg/mL) | LQC (µg/mL) | HQC (µg/mL) | LQC (µg/mL) | |
| 371.105 | 16.441 | 290.497 | 15.902 | |
| 388.888 | 15.735 | 383.686 | 16.895 | |
| 383.461 | 12.462 | 414.378 | 16.081 | |
| 337.262 | 18.304 | 408.799 | 17.457 | |
| 381.139 | 15.744 | 427.938 | 16.552 | |
| 369.525 | 16.588 | 305.989 | 16.244 | |
| 371.8967 | 15.8790 | 371.8812 | 16.5218 | |
| 18.51309 | 1.91906 | 59.01829 | 0.57800 | |
| 5.0 | 12.1 | 15.9 | 3.5 | |
| 396 | 15.144 | 396 | 15.144 | |
| 6 | 6 | 6 | 6 | |
| % Change | −6.1 | 9.1 | ||
| % of Mean ratios | 100.0 | 104.0 | ||