Literature DB >> 27822863

Quantitative DNA Analysis Using Droplet Digital PCR.

Rolf H A M Vossen1, Stefan J White2.   

Abstract

Droplet digital PCR (ddPCR) is based on the isolated amplification of thousands of individual DNA molecules simultaneously, with each molecule compartmentalized in a droplet. The presence of amplified product in each droplet is indicated by a fluorescent signal, and the proportion of positive droplets allows the precise quantification of a given sequence. In this chapter we briefly outline the basis of ddPCR, and describe two different applications using the Bio-Rad QX200 system: genotyping copy number variation and quantification of Illumina sequencing libraries.

Entities:  

Keywords:  Copy number variation; DNA quantitation; Digital PCR; NGS

Mesh:

Substances:

Year:  2017        PMID: 27822863     DOI: 10.1007/978-1-4939-6442-0_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  6 in total

1.  Mitigation of the effect of variability in digital PCR assays through use of duplexed reference assays for normalization.

Authors:  Sherry J Coulter
Journal:  Biotechniques       Date:  2018-08       Impact factor: 1.993

Review 2.  Application of Droplet Digital PCR Technology in Muscular Dystrophies Research.

Authors:  Ioana Lambrescu; Alexandra Popa; Emilia Manole; Laura Cristina Ceafalan; Gisela Gaina
Journal:  Int J Mol Sci       Date:  2022-04-27       Impact factor: 6.208

3.  Preanalytical blood sample workup for cell-free DNA analysis using Droplet Digital PCR for future molecular cancer diagnostics.

Authors:  Joost H van Ginkel; Daan A van den Broek; Joyce van Kuik; Dorothé Linders; Roel de Weger; Stefan M Willems; Manon M H Huibers
Journal:  Cancer Med       Date:  2017-09-21       Impact factor: 4.452

4.  Design and storage stability of reference materials for microfluidic quantitative PCR-based equine gene doping tests.

Authors:  Teruaki Tozaki; Aoi Ohnuma; Mio Kikuchi; Taichiro Ishige; Hironaga Kakoi; Kei-Ichi Hirota; Kanichi Kusano; Shun-Ichi Nagata
Journal:  J Equine Sci       Date:  2021-12-28

Review 5.  Application of Droplet Digital PCR to Detection of Mycobacterium tuberculosis and Mycobacterium leprae Infections: A Narrative Review.

Authors:  Yuxin Fan; Jingjing Chen; Meixiao Liu; Xin Xu; Yu Zhang; Peng Yue; Wenjing Cao; Zhenhua Ji; Xuan Su; Shiyuan Wen; Jing Kong; Guozhong Zhou; Bingxue Li; Yan Dong; Aihua Liu; Fukai Bao
Journal:  Infect Drug Resist       Date:  2022-03-15       Impact factor: 4.003

6.  Peripheral blood marker of residual acute leukemia after hematopoietic cell transplantation using multi-plex digital droplet PCR.

Authors:  M Stanojevic; M Grant; S K Vesely; S Knoblach; C G Kanakry; J Nazarian; E Panditharatna; K Panchapakesan; R E Gress; J Holter-Chakrabarty; Kirsten M Williams
Journal:  Front Immunol       Date:  2022-09-29       Impact factor: 8.786

  6 in total

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