Literature DB >> 27822711

The complete mitogenome of a jumping spider Carrhotus xanthogramma (Araneae: Salticidae) and comparative analysis in four salticid mitogenomes.

Wen-Yuan Fang1, Zheng-Liang Wang1, Chao Li1, Xiao-Qing Yang1, Xiao-Ping Yu2.   

Abstract

The complete mitogenome of the jumping spider Carrhotus xanthogramma was determined and comparative analysis among four salticid mitogenomes was conducted. The circular genome is 14,563 bp in size and contains a complete set of genes that usually present in the metazoa. All of the 13 protein-coding genes begin with a typical ATN codon and stop with the canonical stop codons, except for ND4 and ND4L genes with an incomplete stop codon T. All of the tRNAs cannot be formed the fully paired acceptor stems and seven out of them cannot be folded into the typical cloverleaf-shaped secondary structures. The tRNA Glu gene translocates its position as compared to the mitogenomes of other three determined jumping spiders. The A+T content of the majority strand and the A+T-rich region are 75.1 and 80%, respectively. The phylogenetic relationships based on concatenated nucleotide and amino acid sequences of 13 protein-coding genes using Maximum Likelihood and Bayesian Inference methods indicated that mitogenome sequences were useful in resolving higher-level relationship of Araneae.

Entities:  

Keywords:  Carrhotus xanthogramma; Jumping spider; Mitochondrial genome; Phylogeny; Salticidae

Mesh:

Substances:

Year:  2016        PMID: 27822711     DOI: 10.1007/s10709-016-9936-8

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  36 in total

1.  Evidence for multiple reversals of asymmetric mutational constraints during the evolution of the mitochondrial genome of metazoa, and consequences for phylogenetic inferences.

Authors:  Alexandre Hassanin; Nelly Léger; Jean Deutsch
Journal:  Syst Biol       Date:  2005-04       Impact factor: 15.683

2.  The use of genome-level characters for phylogenetic reconstruction.

Authors:  Jeffrey L Boore
Journal:  Trends Ecol Evol       Date:  2006-06-08       Impact factor: 17.712

3.  The complete mitochondrial genome of the wolf spider Wadicosa fidelis (Araneae: Lycosidae).

Authors:  Zheng-Liang Wang; Chao Li; Wen-Yuan Fang; Xiao-Ping Yu
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2014-12-08       Impact factor: 1.514

4.  A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny.

Authors:  Matthias Bernt; Christoph Bleidorn; Anke Braband; Johannes Dambach; Alexander Donath; Guido Fritzsch; Anja Golombek; Heike Hadrys; Frank Jühling; Karen Meusemann; Martin Middendorf; Bernhard Misof; Marleen Perseke; Lars Podsiadlowski; Björn von Reumont; Bernd Schierwater; Martin Schlegel; Michael Schrödl; Sabrina Simon; Peter F Stadler; Isabella Stöger; Torsten H Struck
Journal:  Mol Phylogenet Evol       Date:  2013-05-16       Impact factor: 4.286

5.  The biogeography and age of salticid spider radiations (Araneae: Salticidae).

Authors:  Melissa R Bodner; Wayne P Maddison
Journal:  Mol Phylogenet Evol       Date:  2012-06-23       Impact factor: 4.286

6.  Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes.

Authors:  N T Perna; T D Kocher
Journal:  J Mol Evol       Date:  1995-09       Impact factor: 2.395

7.  The mitochondrial sequences of Heptathela hangzhouensis and Ornithoctonus huwena reveal unique gene arrangements and atypical tRNAs.

Authors:  Yang Qiu; Daxiang Song; Kaiya Zhou; Hongying Sun
Journal:  J Mol Evol       Date:  2005-01       Impact factor: 2.395

8.  Complete mitochondrial genomes of the human follicle mites Demodex brevis and D. folliculorum: novel gene arrangement, truncated tRNA genes, and ancient divergence between species.

Authors:  Michael F Palopoli; Samuel Minot; Dorothy Pei; Alicia Satterly; Julie Endrizzi
Journal:  BMC Genomics       Date:  2014-12-16       Impact factor: 3.969

9.  Structure of the retinae of the principal eyes of jumping spiders (Salticidae: dendryphantinae) in relation to visual optics.

Authors:  M F Land
Journal:  J Exp Biol       Date:  1969-11       Impact factor: 3.312

10.  Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera).

Authors:  Jimeng Hua; Ming Li; Pengzhi Dong; Ying Cui; Qiang Xie; Wenjun Bu
Journal:  BMC Genomics       Date:  2008-12-17       Impact factor: 3.969

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  1 in total

1.  The Complete Mitochondrial Genome of endemic giant tarantula, Lyrognathus crotalus (Araneae: Theraphosidae) and comparative analysis.

Authors:  Vikas Kumar; Kaomud Tyagi; Rajasree Chakraborty; Priya Prasad; Shantanu Kundu; Inderjeet Tyagi; Kailash Chandra
Journal:  Sci Rep       Date:  2020-01-09       Impact factor: 4.379

  1 in total

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