| Literature DB >> 27822123 |
Berit Skjødeberg Toftegaard1, Louise Mahncke Guldbrandt1, Kaare Rud Flarup2, Hanne Beyer3, Flemming Bro4, Peter Vedsted5.
Abstract
BACKGROUND: Accurate identification of specific patient populations is a crucial tool in health care. A prerequisite for exploring the actions taken by general practitioners (GPs) on symptoms of cancer is being able to identify patients urgently referred for suspected cancer. Such system is not available in Denmark; however, all referrals are electronically stored. This study aimed to develop and test an algorithm based on referral text to identify urgent cancer referrals from general practice.Entities:
Keywords: Denmark; algorithm; cancer; early diagnosis; general practice; referral
Year: 2016 PMID: 27822123 PMCID: PMC5087768 DOI: 10.2147/CLEP.S114721
Source DB: PubMed Journal: Clin Epidemiol ISSN: 1179-1349 Impact factor: 4.790
Characteristics of the four PCR-P
| Populations | Inclusion criteria | Age of referred patients | Males | Urgently referred patients | ||
|---|---|---|---|---|---|---|
|
|
| |||||
| Requesters | Receivers | Patients | Median/years (IQI) | % (95% CI) | % (95% CI) | |
| PCR-P I | GPs in DK | Hospital (DK) | All age | 52.0 | 40.3 | 9.1 |
| PCR-P II | GPs in CDR | Hospital (CDR) exc. psychiatric | ≥ 40 years | 62.8 | 43.5 | 10.7 |
| PCR-P III | GPs in CDR | Hospital (CDR) exc. psychiatric | ≥ 40 years | 60.7 | 42.7 | 13.5 |
| PCR-P IV | GPs in CDR | Hospital (CDR) exc. psychiatric | ≥40 years | 59.2 | 42.5 | 12.8 |
Notes:
Private specialists include the fields of otolaryngology, dermatology, gynecology, surgery, plastic surgery, or neurology in the Central Denmark Region.
Abbreviations: GP, general practitioner; DK, Denmark; CDR, Central Denmark Region; CRR-P, Cancer Referral Reference population; PCR-P, Primary Care Referral population; CI, confidence interval; IQI, interquartile intervals; exc., excluding.
The performance of the stepped algorithms on each population
| Step-1 algorithm | Step-2 algorithm | Step-3 algorithm | Final algorithm | |
|---|---|---|---|---|
| Sensitivity % (95% CI) | 89.8 (84.4–95.1) | 96.9 (93.8–99.9) | 95.3 (91.5–99.0) | 95.3 (91.5–99.0) |
| Sensitivity % (95% CI) | 85.7 (82.6–88.8) | 94.8 (92.8–96.7) | 94.6 (92.6–96.6) | 93.8 (91.6–95.9) |
| Sensitivity % (95% CI) | 63.7 (53.0–73.6) | 97.8 (92.3–99.7) | 94.5 (87.6–98.2) | 94.5 (87.6–98.2) |
| Specificity % (95% CI) | 90.8 (88.7–92.6) | 83.2 (80.6–85.5) | 92.2 (90.2–93.8) | 95.7 (94.2–96.9) |
| PPV % (95% CI) | 40.8 (32.7–49.4) | 36.8 (30.7–43.2) | 54.8 (46.6–62.7) | 68.8 (59.9–76.8) |
| NPV % (95% CI) | 96.2 (94.6–97.3) | 99.7 (99.1–100.0) | 99.4 (98.6–99.8) | 99.4 (98.7–99.8) |
| Sensitivity % (95% CI) | 78.9 (72.8–84.2) | 97.2 (94.0–99.0) | 94.8 (90.9–97.4) | 93.0 (88.7–96.0) |
| Specificity % (95% CI) | 84.9 (83.2–86.6) | 76.6 (74.6–78.6) | 90.4 (88.9–91.7) | 95.2 (94.2–96.2) |
| PPV % (95% CI) | 38.4 (33.9–43.2) | 33.1 (29.4–37.0) | 54.0 (48.8–59.1) | 70.0 (64.3–75.2) |
| NPV % (95% CI) | 97.1 (96.2–97.9) | 99.6 (99.1–99.8) | 99.3 (98.8–99.7) | 99.1 (98.6–99.5) |
| Sensitivity % (95% CI) | 76.1 (70.8–80.9) | 96.2 (93.4–98.1) | 93.9 (90.5–96.3) | 93.9 (90.5–96.3) |
| Specificity % (95% CI) | 81.6 (79.8–83.3) | 73.9 (71.8–75.8) | 88.3 (86.8–89.7) | 93.7 (92.5–96.3) |
| PPV % (95% CI) | 39.2 (35.2–43.3) | 36.5 (33.1–40.9) | 55.6 (51.1–60.0) | 69.8 (65.0–74.3) |
| NPV % (95% CI) | 95.6 (94.5–96.6) | 99.2 (98.6–99.6) | 98.9 (98.3–99.4) | 99.0 (98.4–99.4) |
| Sensitivity % (95% CI) | N/A | N/A | N/A | 93.6 (89.8–96.3) |
| Specificity % (95% CI) | N/A | N/A | N/A | 97.3 (96.4–98.0) |
| PPV % (95% CI) | N/A | N/A | N/A | 83.6 (78.7–87.7) |
| NPV % (95% CI) | N/A | N/A | N/A | 99.0 (98.4–99.5) |
Notes:
The performance of the algorithms on the Cancer Referral Reference populations (known to be urgent cancer referrals) was assessed by sensitivity.
The performance of the algorithms on the Primary Care Referral populations was assessed by sensitivity, specificity, and positive and negative predictive values; all with 95% CIs.
Abbreviations: GP, general practitioner; CI, confidence interval, CRR-P, Cancer Referral Reference population; PCR-P, Primary Care Referral Population; PPV, positive predictive value; NPV, negative predictive value; N/A, not applicable.
Figure 1The stepwise development of the algorithm.
Abbreviations: CRR-P, Cancer Referral Reference population; PCR-P, Primary Care Referral population; PPV, positive predictive value; NPV, negative predictive value; W, word; F, Fields; MW, misleading word.
True- and false-positive findings of important identifying words from the final algorithm
| Important identifying words | Positive findings of algorithm applied to PCR-P III (n=394)
| Positive findings of algorithm applied to PCR-P IV (n=280)
| ||
|---|---|---|---|---|
| True positives (%) | False positives (%) | True positives (%) | False positives (%) | |
| 82 (29.8) | 4 (3.4) | 74 (31.6) | 3 (6.5) | |
| 59 (21.5) | 22 (18.5) | 53 (22.7) | 9 (19.6) | |
| Cancer | 93 (33.8) | 44 (37.0) | 73 (31.2) | 8 (17.4) |
| Malign | 24 (8.7) | 17 (14.3) | 19 (8.1) | 7 (15.2) |
| c. | 14 (5.1) | 2 (1.7) | 11 (4.7) | 0 (0.0) |
| 143 (52.0) | 64 (53.8) | 126 (53.9) | 24 (52.2) | |
Notes:
Danish term for cancer pathway.
Danish term for cancer.
c. includes c., c.pulm, c.panc, c.cerv, c.uteri, c.mamma, c.cere, and c.test.
The last row gives the combination of words that measure the appearance of “cancer wording.”
Abbreviation: PCR-P, Primary Care Referral Population.
Subgroup categories of false-positive findings of the final algorithm
| Main category N (%) | Subgroup categories, n (%) | ||||||
|---|---|---|---|---|---|---|---|
|
| |||||||
| Not urgent cancer referral | Earlier diagnosed cancer | Earlier suspicion for cancer rejected | Urgent referral for heart disease | Nonmelanoma skin cancer | Hereditary disposure or fear for cancer | Others | |
| False positives | 119 (100.0) | 75 (63.0) | 15 (12.6) | 0 (0.0) | 2 (1.7) | 11 (9.2) | 16 (13.4) |
Notes: The final algorithm was applied to the Primary Care Referral population III. A false-positive finding was manually assessed as “not urgent cancer referral” and incorrectly identified by the algorithm. “Not urgent cancer referrals” were manually divided into subgroup categories.