Literature DB >> 27818507

The origin and evolution of cell types.

Detlev Arendt1,2, Jacob M Musser1, Clare V H Baker3, Aviv Bergman4,5, Connie Cepko6, Douglas H Erwin5,7, Mihaela Pavlicev8, Gerhard Schlosser9, Stefanie Widder10, Manfred D Laubichler5,11,12, Günter P Wagner13,14,15.   

Abstract

Cell types are the basic building blocks of multicellular organisms and are extensively diversified in animals. Despite recent advances in characterizing cell types, classification schemes remain ambiguous. We propose an evolutionary definition of a cell type that allows cell types to be delineated and compared within and between species. Key to cell type identity are evolutionary changes in the 'core regulatory complex' (CoRC) of transcription factors, that make emergent sister cell types distinct, enable their independent evolution and regulate cell type-specific traits termed apomeres. We discuss the distinction between developmental and evolutionary lineages, and present a roadmap for future research.

Mesh:

Year:  2016        PMID: 27818507     DOI: 10.1038/nrg.2016.127

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  147 in total

1.  Is there a nervous system in sponges?

Authors:  W C JONES
Journal:  Biol Rev Camb Philos Soc       Date:  1962-02

Review 2.  Single-cell epigenomics: techniques and emerging applications.

Authors:  Omer Schwartzman; Amos Tanay
Journal:  Nat Rev Genet       Date:  2015-10-13       Impact factor: 53.242

Review 3.  The evolution of cell types in animals: emerging principles from molecular studies.

Authors:  Detlev Arendt
Journal:  Nat Rev Genet       Date:  2008-11       Impact factor: 53.242

Review 4.  Computational and analytical challenges in single-cell transcriptomics.

Authors:  Oliver Stegle; Sarah A Teichmann; John C Marioni
Journal:  Nat Rev Genet       Date:  2015-01-28       Impact factor: 53.242

5.  Replacing the rod with the cone transducin subunit decreases sensitivity and accelerates response decay.

Authors:  C-K Chen; M L Woodruff; F S Chen; H Shim; M C Cilluffo; G L Fain
Journal:  J Physiol       Date:  2010-07-05       Impact factor: 5.182

Review 6.  Terminal Selectors of Neuronal Identity.

Authors:  Oliver Hobert
Journal:  Curr Top Dev Biol       Date:  2016-01-14       Impact factor: 4.897

7.  A gene regulatory network controls the binary fate decision of rod and bipolar cells in the vertebrate retina.

Authors:  Sui Wang; Cem Sengel; Mark M Emerson; Constance L Cepko
Journal:  Dev Cell       Date:  2014-08-21       Impact factor: 12.270

8.  Transcription factor Foxp3 and its protein partners form a complex regulatory network.

Authors:  Dipayan Rudra; Paul deRoos; Ashutosh Chaudhry; Rachel E Niec; Aaron Arvey; Robert M Samstein; Christina Leslie; Scott A Shaffer; David R Goodlett; Alexander Y Rudensky
Journal:  Nat Immunol       Date:  2012-08-26       Impact factor: 25.606

9.  Evolution of protein complexes by duplication of homomeric interactions.

Authors:  Jose B Pereira-Leal; Emmanuel D Levy; Christel Kamp; Sarah A Teichmann
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

Review 10.  Gastric pouches and the mucociliary sole: setting the stage for nervous system evolution.

Authors:  Detlev Arendt; Elia Benito-Gutierrez; Thibaut Brunet; Heather Marlow
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-12-19       Impact factor: 6.237

View more
  153 in total

1.  Conserved gene regulatory module specifies lateral neural borders across bilaterians.

Authors:  Yongbin Li; Di Zhao; Takeo Horie; Geng Chen; Hongcun Bao; Siyu Chen; Weihong Liu; Ryoko Horie; Tao Liang; Biyu Dong; Qianqian Feng; Qinghua Tao; Xiao Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

2.  The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution.

Authors:  James A Briggs; Caleb Weinreb; Daniel E Wagner; Sean Megason; Leonid Peshkin; Marc W Kirschner; Allon M Klein
Journal:  Science       Date:  2018-04-26       Impact factor: 47.728

3.  Genome-Wide Characterization of DNase I-Hypersensitive Sites and Cold Response Regulatory Landscapes in Grasses.

Authors:  Jinlei Han; Pengxi Wang; Qiongli Wang; Qingfang Lin; Zhiyong Chen; Guangrun Yu; Chenyong Miao; Yihang Dao; Ruoxi Wu; James C Schnable; Haibao Tang; Kai Wang
Journal:  Plant Cell       Date:  2020-05-29       Impact factor: 11.277

Review 4.  Perspectives on defining cell types in the brain.

Authors:  Eran A Mukamel; John Ngai
Journal:  Curr Opin Neurobiol       Date:  2018-12-06       Impact factor: 6.627

Review 5.  A periodic table of cell types.

Authors:  Bo Xia; Itai Yanai
Journal:  Development       Date:  2019-06-27       Impact factor: 6.868

Review 6.  Neuronal differentiation strategies: insights from single-cell sequencing and machine learning.

Authors:  Nikolaos Konstantinides; Claude Desplan
Journal:  Development       Date:  2020-12-08       Impact factor: 6.868

7.  Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex.

Authors:  Tomasz J Nowakowski; Aparna Bhaduri; Alex A Pollen; Beatriz Alvarado; Mohammed A Mostajo-Radji; Elizabeth Di Lullo; Maximilian Haeussler; Carmen Sandoval-Espinosa; Siyuan John Liu; Dmitry Velmeshev; Johain Ryad Ounadjela; Joe Shuga; Xiaohui Wang; Daniel A Lim; Jay A West; Anne A Leyrat; W James Kent; Arnold R Kriegstein
Journal:  Science       Date:  2017-12-08       Impact factor: 47.728

Review 8.  Gene, cell, and organ multiplication drives inner ear evolution.

Authors:  Bernd Fritzsch; Karen L Elliott
Journal:  Dev Biol       Date:  2017-09-01       Impact factor: 3.582

9.  A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility.

Authors:  Darren A Cusanovich; Andrew J Hill; Delasa Aghamirzaie; Riza M Daza; Hannah A Pliner; Joel B Berletch; Galina N Filippova; Xingfan Huang; Lena Christiansen; William S DeWitt; Choli Lee; Samuel G Regalado; David F Read; Frank J Steemers; Christine M Disteche; Cole Trapnell; Jay Shendure
Journal:  Cell       Date:  2018-08-02       Impact factor: 41.582

10.  Phenotypic Convergence: Distinct Transcription Factors Regulate Common Terminal Features.

Authors:  Nikolaos Konstantinides; Katarina Kapuralin; Chaimaa Fadil; Luendreo Barboza; Rahul Satija; Claude Desplan
Journal:  Cell       Date:  2018-06-18       Impact factor: 41.582

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.