Literature DB >> 27815828

Transcriptomic Signature of Atherosclerosis in the Peripheral Blood: Fact or Fiction?

Hsiao-Huei Chen1,2, Alexandre F R Stewart3,4.   

Abstract

The notion that gene expression signatures in blood can serve as biomarkers of disease states is not new. In the case of atherosclerosis, and coronary artery disease in particular, whether changes in gene expression in peripheral blood mononuclear cells reflects disease processes occurring in the vessel wall remains controversial. When comparing 15 studies that identified 706 differentially expressed genes, only 23 genes were replicated in 2 to 3 studies, at most. This low level of replication may reflect sample sizes too small to overcome heterogeneity in the response to disease. Genetic differences affect how each person responds to disease and what genes are altered. Recent studies with larger cohorts (over 5000 individuals) that considered the effect of common genetic variants still could not claim disease signature genes as biomarkers suggesting that even larger case-control studies will be required to achieve the required statistical power. On the other hand, out of 7 studies that identified 58 microRNAs, 12 were concordant in 2 or more studies, suggesting that microRNAs may be less affected by genetic differences and more accurately reflect the disease process. Here, we review the current state of knowledge on expression profiling and its utility for predicting coronary artery disease status and mortality.

Entities:  

Keywords:  Atherosclerosis; Blood; Expression profiling; MicroRNAs; Personalized medicine

Mesh:

Substances:

Year:  2016        PMID: 27815828     DOI: 10.1007/s11883-016-0634-x

Source DB:  PubMed          Journal:  Curr Atheroscler Rep        ISSN: 1523-3804            Impact factor:   5.113


  40 in total

1.  Multicenter validation of the diagnostic accuracy of a blood-based gene expression test for assessing obstructive coronary artery disease in nondiabetic patients.

Authors:  Steven Rosenberg; Michael R Elashoff; Philip Beineke; Susan E Daniels; James A Wingrove; Whittemore G Tingley; Philip T Sager; Amy J Sehnert; May Yau; William E Kraus; L Kristin Newby; Robert S Schwartz; Szilard Voros; Stephen G Ellis; Naeem Tahirkheli; Ron Waksman; John McPherson; Alexandra Lansky; Mary E Winn; Nicholas J Schork; Eric J Topol
Journal:  Ann Intern Med       Date:  2010-10-05       Impact factor: 25.391

2.  Differential microRNA expression profiles in peripheral arterial disease.

Authors:  Philip W Stather; Nicolas Sylvius; John B Wild; Edward Choke; Robert D Sayers; Matthew J Bown
Journal:  Circ Cardiovasc Genet       Date:  2013-10

3.  Circulating transcriptome reveals markers of atherosclerosis.

Authors:  Willmar D Patino; Omar Y Mian; Ju-Gyeong Kang; Satoaki Matoba; Linda D Bartlett; Brenda Holbrook; Hugh H Trout; Louis Kozloff; Paul M Hwang
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-22       Impact factor: 11.205

4.  Peripheral blood gene expression profile of atherosclerotic coronary artery disease in patients of different ethnicity in Malaysia.

Authors:  Mohd Hafiz Ngoo Abdullah; Zulhabri Othman; Hamdan Mohd Noor; Siti Suri Arshad; Ahmad Khairuddin Mohd Yusof; Rahman Jamal; Abdul Rashid Abdul Rahman
Journal:  J Cardiol       Date:  2012-06-26       Impact factor: 3.159

5.  Common genes in coronary artery disease from Europe, Asia and North America regardless of race and lifestyle.

Authors:  R Gong; M-H Chen; L-S Peng; S-L Wei
Journal:  Eur Rev Med Pharmacol Sci       Date:  2015       Impact factor: 3.507

6.  The peripheral blood mononuclear cell microRNA signature of coronary artery disease.

Authors:  Menno Hoekstra; Christian A C van der Lans; Bente Halvorsen; Lars Gullestad; Johan Kuiper; Pål Aukrust; Theo J C van Berkel; Erik A L Biessen
Journal:  Biochem Biophys Res Commun       Date:  2010-03-15       Impact factor: 3.575

Review 7.  MicroRNA Regulation of Atherosclerosis.

Authors:  Mark W Feinberg; Kathryn J Moore
Journal:  Circ Res       Date:  2016-02-19       Impact factor: 17.367

8.  Integromic analysis of genetic variation and gene expression identifies networks for cardiovascular disease phenotypes.

Authors:  Chen Yao; Brian H Chen; Roby Joehanes; Burcak Otlu; Xiaoling Zhang; Chunyu Liu; Tianxiao Huan; Oznur Tastan; L Adrienne Cupples; James B Meigs; Caroline S Fox; Jane E Freedman; Paul Courchesne; Christopher J O'Donnell; Peter J Munson; Sunduz Keles; Daniel Levy
Journal:  Circulation       Date:  2014-12-22       Impact factor: 29.690

9.  Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease.

Authors:  Heribert Schunkert; Inke R König; Sekar Kathiresan; Muredach P Reilly; Themistocles L Assimes; Hilma Holm; Michael Preuss; Alexandre F R Stewart; Maja Barbalic; Christian Gieger; Devin Absher; Zouhair Aherrahrou; Hooman Allayee; David Altshuler; Sonia S Anand; Karl Andersen; Jeffrey L Anderson; Diego Ardissino; Stephen G Ball; Anthony J Balmforth; Timothy A Barnes; Diane M Becker; Lewis C Becker; Klaus Berger; Joshua C Bis; S Matthijs Boekholdt; Eric Boerwinkle; Peter S Braund; Morris J Brown; Mary Susan Burnett; Ian Buysschaert; John F Carlquist; Li Chen; Sven Cichon; Veryan Codd; Robert W Davies; George Dedoussis; Abbas Dehghan; Serkalem Demissie; Joseph M Devaney; Patrick Diemert; Ron Do; Angela Doering; Sandra Eifert; Nour Eddine El Mokhtari; Stephen G Ellis; Roberto Elosua; James C Engert; Stephen E Epstein; Ulf de Faire; Marcus Fischer; Aaron R Folsom; Jennifer Freyer; Bruna Gigante; Domenico Girelli; Solveig Gretarsdottir; Vilmundur Gudnason; Jeffrey R Gulcher; Eran Halperin; Naomi Hammond; Stanley L Hazen; Albert Hofman; Benjamin D Horne; Thomas Illig; Carlos Iribarren; Gregory T Jones; J Wouter Jukema; Michael A Kaiser; Lee M Kaplan; John J P Kastelein; Kay-Tee Khaw; Joshua W Knowles; Genovefa Kolovou; Augustine Kong; Reijo Laaksonen; Diether Lambrechts; Karin Leander; Guillaume Lettre; Mingyao Li; Wolfgang Lieb; Christina Loley; Andrew J Lotery; Pier M Mannucci; Seraya Maouche; Nicola Martinelli; Pascal P McKeown; Christa Meisinger; Thomas Meitinger; Olle Melander; Pier Angelica Merlini; Vincent Mooser; Thomas Morgan; Thomas W Mühleisen; Joseph B Muhlestein; Thomas Münzel; Kiran Musunuru; Janja Nahrstaedt; Christopher P Nelson; Markus M Nöthen; Oliviero Olivieri; Riyaz S Patel; Chris C Patterson; Annette Peters; Flora Peyvandi; Liming Qu; Arshed A Quyyumi; Daniel J Rader; Loukianos S Rallidis; Catherine Rice; Frits R Rosendaal; Diana Rubin; Veikko Salomaa; M Lourdes Sampietro; Manj S Sandhu; Eric Schadt; Arne Schäfer; Arne Schillert; Stefan Schreiber; Jürgen Schrezenmeir; Stephen M Schwartz; David S Siscovick; Mohan Sivananthan; Suthesh Sivapalaratnam; Albert Smith; Tamara B Smith; Jaapjan D Snoep; Nicole Soranzo; John A Spertus; Klaus Stark; Kathy Stirrups; Monika Stoll; W H Wilson Tang; Stephanie Tennstedt; Gudmundur Thorgeirsson; Gudmar Thorleifsson; Maciej Tomaszewski; Andre G Uitterlinden; Andre M van Rij; Benjamin F Voight; Nick J Wareham; George A Wells; H-Erich Wichmann; Philipp S Wild; Christina Willenborg; Jaqueline C M Witteman; Benjamin J Wright; Shu Ye; Tanja Zeller; Andreas Ziegler; Francois Cambien; Alison H Goodall; L Adrienne Cupples; Thomas Quertermous; Winfried März; Christian Hengstenberg; Stefan Blankenberg; Willem H Ouwehand; Alistair S Hall; Panos Deloukas; John R Thompson; Kari Stefansson; Robert Roberts; Unnur Thorsteinsdottir; Christopher J O'Donnell; Ruth McPherson; Jeanette Erdmann; Nilesh J Samani
Journal:  Nat Genet       Date:  2011-03-06       Impact factor: 38.330

10.  Signature of circulating microRNAs as potential biomarkers in vulnerable coronary artery disease.

Authors:  Jingyi Ren; Jing Zhang; Ning Xu; Guanping Han; Qiang Geng; Junxian Song; Sufang Li; Jianqing Zhao; Hong Chen
Journal:  PLoS One       Date:  2013-12-05       Impact factor: 3.240

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  4 in total

1.  Plasma proteomic analysis reveals altered protein abundances in cardiovascular disease.

Authors:  Vasiliki Lygirou; Agnieszka Latosinska; Manousos Makridakis; William Mullen; Christian Delles; Joost P Schanstra; Jerome Zoidakis; Burkert Pieske; Harald Mischak; Antonia Vlahou
Journal:  J Transl Med       Date:  2018-04-17       Impact factor: 5.531

2.  Evidence of association of circulating epigenetic-sensitive biomarkers with suspected coronary heart disease evaluated by Cardiac Computed Tomography.

Authors:  Teresa Infante; Ernesto Forte; Concetta Schiano; Bruna Punzo; Filippo Cademartiri; Carlo Cavaliere; Marco Salvatore; Claudio Napoli
Journal:  PLoS One       Date:  2019-01-23       Impact factor: 3.240

Review 3.  Unveiling ncRNA regulatory axes in atherosclerosis progression.

Authors:  Estanislao Navarro; Adrian Mallén; Josep M Cruzado; Joan Torras; Miguel Hueso
Journal:  Clin Transl Med       Date:  2020-02-03

Review 4.  The Molecular Basis of Predicting Atherosclerotic Cardiovascular Disease Risk.

Authors:  Matthew Nayor; Kemar J Brown; Ramachandran S Vasan
Journal:  Circ Res       Date:  2021-01-21       Impact factor: 17.367

  4 in total

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