Literature DB >> 27815695

High throughput sequencing reveals a novel fabavirus infecting sweet cherry.

D E V Villamor1, S S Pillai2, K C Eastwell2.   

Abstract

The genus Fabavirus currently consists of five species represented by viruses that infect a wide range of hosts but none reported from temperate climate fruit trees. A virus with genomic features resembling fabaviruses (tentatively named Prunus virus F, PrVF) was revealed by high throughput sequencing of extracts from a sweet cherry tree (Prunus avium). PrVF was subsequently shown to be graft transmissible and further identified in three other non-symptomatic Prunus spp. from different geographical locations. Two genetic variants of RNA1 and RNA2 coexisted in the same samples. RNA1 consisted of 6,165 and 6,163 nucleotides, and RNA2 consisted of 3,622 and 3,468 nucleotides.

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Year:  2016        PMID： 27815695     DOI： 10.1007/s00705-016-3141-z

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  6 in total

1.  Variability Studies of Two Prunus-Infecting Fabaviruses with the Aid of High-Throughput Sequencing.

Authors:  Igor Koloniuk; Tatiana Sarkisova; Karel Petrzik; Ondřej Lenz; Jaroslava Přibylová; Jana Fránová; Josef Špak; Leonidas Lotos; Christina Beta; Asimina Katsiani; Thierry Candresse; Varvara I Maliogka
Journal:  Viruses       Date:  2018-04-18       Impact factor: 5.048

Review 2.  Recent Advances on Detection and Characterization of Fruit Tree Viruses Using High-Throughput Sequencing Technologies.

Authors:  Varvara I Maliogka; Angelantonio Minafra; Pasquale Saldarelli; Ana B Ruiz-García; Miroslav Glasa; Nikolaos Katis; Antonio Olmos
Journal:  Viruses       Date:  2018-08-17       Impact factor: 5.048

3.  High-Throughput Sequencing Assists Studies in Genomic Variability and Epidemiology of Little Cherry Virus 1 and 2 infecting Prunus spp. in Belgium.

Authors:  Rachid Tahzima; Yoika Foucart; Gertie Peusens; Tim Beliën; Sébastien Massart; Kris De Jonghe
Journal:  Viruses       Date:  2019-06-29       Impact factor: 5.048

4.  Deep sequencing reveals the first fabavirus infecting peach.

Authors:  Yan He; Li Cai; Lingling Zhou; Zuokun Yang; Ni Hong; Guoping Wang; Shifang Li; Wenxing Xu
Journal:  Sci Rep       Date:  2017-09-12       Impact factor: 4.379

5.  Small RNA NGS Revealed the Presence of Cherry Virus A and Little Cherry Virus 1 on Apricots in Hungary.

Authors:  Dániel Baráth; Nikoletta Jaksa-Czotter; János Molnár; Tünde Varga; Júlia Balássy; Luca Krisztina Szabó; Zoltán Kirilla; Gábor E Tusnády; Éva Preininger; Éva Várallyay
Journal:  Viruses       Date:  2018-06-11       Impact factor: 5.048

6.  RNA2-encoded VP37 protein of Broad bean wilt virus 1 is a determinant of pathogenicity, host susceptibility, and a suppressor of post-transcriptional gene silencing.

Authors:  Caterina Carpino; Inmaculada Ferriol Safont; Laura Elvira-González; Vicente Medina; Luis Rubio; Ezio Peri; Salvatore Davino; Luis Galipienso Torregrosa
Journal:  Mol Plant Pathol       Date:  2020-09-16       Impact factor: 5.663
  6 in total

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