Literature DB >> 27812946

A Gene Ontology Tutorial in Python.

Alex Warwick Vesztrocy1,2, Christophe Dessimoz3,4,5,6,7.   

Abstract

This chapter is a tutorial on using Gene Ontology resources in the Python programming language. This entails querying the Gene Ontology graph, retrieving Gene Ontology annotations, performing gene enrichment analyses, and computing basic semantic similarity between GO terms. An interactive version of the tutorial, including solutions, is available at http://gohandbook.org .

Keywords:  Gene Ontology; Python; Tutorial

Mesh:

Year:  2017        PMID: 27812946     DOI: 10.1007/978-1-4939-3743-1_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  3 in total

1.  Gene Mining and Flavour Metabolism Analyses of Wickerhamomyces anomalus Y-1 Isolated From a Chinese Liquor Fermentation Starter.

Authors:  Xin Shi; Xin Wang; Xiaoge Hou; Qing Tian; Ming Hui
Journal:  Front Microbiol       Date:  2022-05-02       Impact factor: 6.064

2.  Development of a prognostic index of colon adenocarcinoma based on immunogenomic landscape analysis.

Authors:  Weijie Qiang; Yifei Dai; Guibo Sun; Xiaoyan Xing; Xiaobo Sun
Journal:  Ann Transl Med       Date:  2020-03

3.  Explore the Protective Role of Obesity in the Progression of Myocardial Infarction.

Authors:  Siyuan Zhao; Rongyuan Cao; Shuhua Zhang; Yan Kang
Journal:  Front Cardiovasc Med       Date:  2021-03-25
  3 in total

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