Literature DB >> 27812256

Detection of α-Thalassemia by Using Multiplex Ligation-Dependent Probe Amplification as an Additional Method for Rare Mutations in Southern Turkey.

Ozge Ozalp Yuregir1, Akif Ayaz1, Sinem Yalcintepe1, Sezin Canbek1, Didar Yanardag Acik2, Basak Taburoglu Yilmaz3, Tugce B Balci4.   

Abstract

α-thalassemia is the most common single gene disorder in the Cukurova Region in Turkey. It is therefore routinely screened, including premaritally, in our region. The heterogeneous molecular basis of the disease makes α-thalassemia mutation detection difficult and complex. Besides well established methods, multiplex ligation dependent probe amplification (MLPA) is known as an effective, simple and specific method for the detection and characterization of deletions and duplications. We employed MLPA testing to 30 patients with hematological parameters suggestive of α-thalassemia carrier status but was negative for α-thalassemia with conventional reverse dot blot hybridization (RDB). We found α-globin gene deletions in 3 out of 30 (10 %) patients with MLPA. We propose that MLPA can be used as a second tier test in addition to other techniques such as RDB to identify α-thalassemia carriers in high prevalence regions such as ours, thereby allowing clinicians to provide accurate genetic counselling.

Entities:  

Keywords:  Multiplex ligation dependent probe amplification; Reverse dot blot hybridization; Southern Turkey; α-Thalassemia

Year:  2015        PMID: 27812256      PMCID: PMC5074955          DOI: 10.1007/s12288-015-0617-z

Source DB:  PubMed          Journal:  Indian J Hematol Blood Transfus        ISSN: 0971-4502            Impact factor:   0.900


  14 in total

1.  Relative quantification of 40 nucleic acid sequences by multiplex ligation-dependent probe amplification.

Authors:  Jan P Schouten; Cathal J McElgunn; Raymond Waaijer; Danny Zwijnenburg; Filip Diepvens; Gerard Pals
Journal:  Nucleic Acids Res       Date:  2002-06-15       Impact factor: 16.971

2.  Detection of deletions/duplications in α-globin gene cluster by multiplex ligation-dependent probe amplification.

Authors:  Naghmeh Nezhat; Mohammad Taghi Akbari
Journal:  Genet Test Mol Biomarkers       Date:  2012-06-25

3.  Development of a quantitative real-time PCR assay for detection of unknown alpha-globin gene deletions.

Authors:  Mohammad-Sadegh Fallah; Reza Mahdian; Seyyed-Ahmad Aleyasin; Somayeh Jamali; Mina Hayat-Nosaeid; Moretza Karimipour; Marzieh Raeisi; Sirous Zeinali
Journal:  Blood Cells Mol Dis       Date:  2010-04-02       Impact factor: 3.039

4.  Application of MLPA assay to characterize unsolved α-globin gene rearrangements.

Authors:  Alessia Colosimo; Valentina Gatta; Valentina Guida; Eleonora Leodori; Enrica Foglietta; Silvana Rinaldi; Maria Pia Cappabianca; Antonio Amato; Liborio Stuppia; Bruno Dallapiccola
Journal:  Blood Cells Mol Dis       Date:  2010-12-28       Impact factor: 3.039

5.  Characterization of alpha thalassemic genotypes by multiplex ligation-dependent probe amplification in the Brazilian population.

Authors:  C N Suemasu; E M Kimura; D M Oliveira; M A C Bezerra; A S Araújo; F F Costa; M F Sonati
Journal:  Braz J Med Biol Res       Date:  2010-12-17       Impact factor: 2.590

Review 6.  A review of the molecular genetics of the human alpha-globin gene cluster.

Authors:  D R Higgs; M A Vickers; A O Wilkie; I M Pretorius; A P Jarman; D J Weatherall
Journal:  Blood       Date:  1989-04       Impact factor: 22.113

Review 7.  The alpha thalassaemias.

Authors:  D R Higgs; D J Weatherall
Journal:  Cell Mol Life Sci       Date:  2009-04       Impact factor: 9.261

Review 8.  Alpha thalassemia.

Authors:  S A Liebhaber
Journal:  Hemoglobin       Date:  1989       Impact factor: 0.849

9.  Multiplex ligation-dependent probe amplification identification of 17 different beta-globin gene deletions (including four novel mutations) in the UK population.

Authors:  Alice E Gallienne; Hélène M Dréau; Janice McCarthy; Adele T Timbs; Janet M Hampson; Anna Schuh; John M Old; Shirley J Henderson
Journal:  Hemoglobin       Date:  2009       Impact factor: 0.849

Review 10.  The α-thalassemias.

Authors:  Frédéric B Piel; David J Weatherall
Journal:  N Engl J Med       Date:  2014-11-13       Impact factor: 91.245

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  2 in total

1.  [Rapid detection of alpha-globin gene αααanti-3.7 triplets with droplet digital PCR].

Authors:  Xiao-Qian Gong; Xue-Huang Yang; Lin-Li Qiao; Ya-Jun Cheng; Wan-Jun Zhou
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2017-09-20

Review 2.  Applications of next generation sequencing in the screening and diagnosis of thalassemia: A mini-review.

Authors:  Syahirah Amnani Suhaimi; Ihsan Nazurah Zulkipli; Hazim Ghani; Mas Rina Wati Abdul-Hamid
Journal:  Front Pediatr       Date:  2022-09-29       Impact factor: 3.569

  2 in total

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