Literature DB >> 27807470

A BAYESIAN HIERARCHICAL SPATIAL MODEL FOR DENTAL CARIES ASSESSMENT USING NON-GAUSSIAN MARKOV RANDOM FIELDS.

Ick Hoon Jin1, Ying Yuan2, Dipankar Bandyopadhyay3.   

Abstract

Research in dental caries generates data with two levels of hierarchy: that of a tooth overall and that of the different surfaces of the tooth. The outcomes often exhibit spatial referencing among neighboring teeth and surfaces, i.e., the disease status of a tooth or surface might be influenced by the status of a set of proximal teeth/surfaces. Assessments of dental caries (tooth decay) at the tooth level yield binary outcomes indicating the presence/absence of teeth, and trinary outcomes at the surface level indicating healthy, decayed, or filled surfaces. The presence of these mixed discrete responses complicates the data analysis under a unified framework. To mitigate complications, we develop a Bayesian two-level hierarchical model under suitable (spatial) Markov random field assumptions that accommodates the natural hierarchy within the mixed responses. At the first level, we utilize an autologistic model to accommodate the spatial dependence for the tooth-level binary outcomes. For the second level and conditioned on a tooth being non-missing, we utilize a Potts model to accommodate the spatial referencing for the surface-level trinary outcomes. The regression models at both levels were controlled for plausible covariates (risk factors) of caries, and remain connected through shared parameters. To tackle the computational challenges in our Bayesian estimation scheme caused due to the doubly-intractable normalizing constant, we employ a double Metropolis-Hastings sampler. We compare and contrast our model performances to the standard non-spatial (naive) model using a small simulation study, and illustrate via an application to a clinical dataset on dental caries.

Entities:  

Keywords:  Autologistic Model; Bayesian Inference; Dental Caries; Markov Chain Monte Carlo; Potts Model; Spatial Data Analysis

Year:  2016        PMID: 27807470      PMCID: PMC5087817          DOI: 10.1214/16-AOAS917

Source DB:  PubMed          Journal:  Ann Appl Stat        ISSN: 1932-6157            Impact factor:   2.083


  14 in total

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Authors:  Timothy Mutsvari; Dipankar Bandyopadhyay; Dominique Declerck; Emmanuel Lesaffre
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Review 2.  Dental caries.

Authors:  Robert H Selwitz; Amid I Ismail; Nigel B Pitts
Journal:  Lancet       Date:  2007-01-06       Impact factor: 79.321

3.  Modeling longitudinal spatial periodontal data: a spatially adaptive model with tools for specifying priors and checking fit.

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Journal:  Biometrics       Date:  2007-12-31       Impact factor: 2.571

4.  Finite mixture models for mapping spatially dependent disease counts.

Authors:  Marco Alfó; Luciano Nieddu; Donatella Vicari
Journal:  Biom J       Date:  2009-02       Impact factor: 2.207

5.  A Bayesian Image Analysis of Radiation Induced Changes in Tumor Vascular Permeability.

Authors:  Xiaoxi Zhang; Timothy D Johnson; Roderick J A Little; Yue Cao
Journal:  Bayesian Anal       Date:  2010       Impact factor: 3.728

6.  Dental caries analysis in 3- 5-years-old children: a spatial modelling.

Authors:  Solaiman Afroughi; Soghrat Faghihzadeh; Majid Jafari Khaledi; Mehdi Ghandehari Motlagh
Journal:  Arch Oral Biol       Date:  2010-04-09       Impact factor: 2.633

7.  A nonparametric spatial model for periodontal data with non-random missingness.

Authors:  Brian J Reich; Dipankar Bandyopadhyay; Howard D Bondell
Journal:  J Am Stat Assoc       Date:  2013-09-01       Impact factor: 5.033

8.  Bayesian modeling of multivariate spatial binary data with applications to dental caries.

Authors:  Dipankar Bandyopadhyay; Brian J Reich; Elizabeth H Slate
Journal:  Stat Med       Date:  2009-12-10       Impact factor: 2.373

Review 9.  Are we ready to move from operative to non-operative/preventive treatment of dental caries in clinical practice?

Authors:  N B Pitts
Journal:  Caries Res       Date:  2004 May-Jun       Impact factor: 4.056

10.  A Bayesian non-parametric Potts model with application to pre-surgical FMRI data.

Authors:  Timothy D Johnson; Zhuqing Liu; Andreas J Bartsch; Thomas E Nichols
Journal:  Stat Methods Med Res       Date:  2012-05-23       Impact factor: 3.021

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Authors:  Chao Huang; Zhenlin Xu; Zhengyang Shen; Tianyou Luo; Tengfei Li; Daniel Nissman; Amanda Nelson; Yvonne Golightly; Marc Niethammer; Hongtu Zhu
Journal:  Med Image Anal       Date:  2022-01-01       Impact factor: 8.545

  1 in total

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