Literature DB >> 27806272

Allosteric Signaling Is Bidirectional in an Outer-Membrane Transport Protein.

Arthur Sikora1, Benesh Joseph2, Morgan Matson1, Jacob R Staley1, David S Cafiso3.   

Abstract

In BtuB, the Escherichia coli TonB-dependent transporter for vitamin B12, substrate binding to the extracellular surface unfolds a conserved energy coupling motif termed the Ton box into the periplasm. This transmembrane signaling event facilitates an interaction between BtuB and the inner-membrane protein TonB. In this study, continuous-wave and pulse electron paramagnetic resonance in a native outer-membrane preparation demonstrate that signaling also occurs from the periplasmic to the extracellular surface in BtuB. The binding of a TonB fragment to the periplasmic interface alters the configuration of the second extracellular loop and partially dissociates a spin-labeled substrate analog. Moreover, mutants in the periplasmic Ton box that are transport-defective alter the binding site for vitamin B12 in BtuB. This work demonstrates that the Ton box and the extracellular substrate binding site are allosterically coupled in BtuB, and that TonB binding may initiate a partial round of transport.
Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27806272      PMCID: PMC5103032          DOI: 10.1016/j.bpj.2016.09.038

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  35 in total

1.  Substrate-induced exposure of an energy-coupling motif of a membrane transporter.

Authors:  H J Merianos; N Cadieux; C H Lin; R J Kadner; D S Cafiso
Journal:  Nat Struct Biol       Date:  2000-03

2.  Dead-time free measurement of dipole-dipole interactions between electron spins.

Authors:  M Pannier; S Veit; A Godt; G Jeschke; H W Spiess
Journal:  J Magn Reson       Date:  2000-02       Impact factor: 2.229

3.  Conformational exchange in a membrane transport protein is altered in protein crystals.

Authors:  Daniel M Freed; Peter S Horanyi; Michael C Wiener; David S Cafiso
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

4.  Distance Measurement on an Endogenous Membrane Transporter in E. coli Cells and Native Membranes Using EPR Spectroscopy.

Authors:  Benesh Joseph; Arthur Sikora; Enrica Bordignon; Gunnar Jeschke; David S Cafiso; Thomas F Prisner
Journal:  Angew Chem Int Ed Engl       Date:  2015-03-31       Impact factor: 15.336

Review 5.  TonB-dependent transporters: regulation, structure, and function.

Authors:  Nicholas Noinaj; Maude Guillier; Travis J Barnard; Susan K Buchanan
Journal:  Annu Rev Microbiol       Date:  2010       Impact factor: 15.500

6.  Structure of TonB in complex with FhuA, E. coli outer membrane receptor.

Authors:  Peter D Pawelek; Nathalie Croteau; Christopher Ng-Thow-Hing; Cezar M Khursigara; Natalia Moiseeva; Marc Allaire; James W Coulton
Journal:  Science       Date:  2006-06-02       Impact factor: 47.728

7.  Solutes alter the conformation of the ligand binding loops in outer membrane transporters.

Authors:  Miyeon Kim; Qi Xu; David Murray; David S Cafiso
Journal:  Biochemistry       Date:  2007-12-20       Impact factor: 3.162

8.  Structural evidence for iron-free citrate and ferric citrate binding to the TonB-dependent outer membrane transporter FecA.

Authors:  Wyatt W Yue; Sylvestre Grizot; Susan K Buchanan
Journal:  J Mol Biol       Date:  2003-09-12       Impact factor: 5.469

9.  Substrate-induced transmembrane signaling in the cobalamin transporter BtuB.

Authors:  David P Chimento; Arun K Mohanty; Robert J Kadner; Michael C Wiener
Journal:  Nat Struct Biol       Date:  2003-05

10.  Two-way communication between SecY and SecA suggests a Brownian ratchet mechanism for protein translocation.

Authors:  William John Allen; Robin Adam Corey; Peter Oatley; Richard Barry Sessions; Steve A Baldwin; Sheena E Radford; Roman Tuma; Ian Collinson
Journal:  Elife       Date:  2016-05-16       Impact factor: 8.140

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  9 in total

1.  Conformational Dynamics of the Extracellular Loop of BtuB in Whole Cells.

Authors:  Indra D Sahu
Journal:  Biophys J       Date:  2020-09-25       Impact factor: 4.033

2.  Native Cell Environment Constrains Loop Structure in the Escherichia coli Cobalamin Transporter BtuB.

Authors:  David A Nyenhuis; Thushani D Nilaweera; David S Cafiso
Journal:  Biophys J       Date:  2020-09-06       Impact factor: 4.033

3.  HDX-MS performed on BtuB in E. coli outer membranes delineates the luminal domain's allostery and unfolding upon B12 and TonB binding.

Authors:  Adam M Zmyslowski; Michael C Baxa; Isabelle A Gagnon; Tobin R Sosnick
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-12       Impact factor: 12.779

4.  A Dynamic Protein-Protein Coupling between the TonB-Dependent Transporter FhuA and TonB.

Authors:  Jessica L Sarver; Michael Zhang; Lishan Liu; David Nyenhuis; David S Cafiso
Journal:  Biochemistry       Date:  2018-01-26       Impact factor: 3.162

5.  Disulfide Chaperone Knockouts Enable In Vivo Double Spin Labeling of an Outer Membrane Transporter.

Authors:  Thushani D Nilaweera; David A Nyenhuis; Robert K Nakamoto; David S Cafiso
Journal:  Biophys J       Date:  2019-09-10       Impact factor: 4.033

6.  Extracellular loops of BtuB facilitate transport of vitamin B12 through the outer membrane of E. coli.

Authors:  Tomasz Pieńko; Joanna Trylska
Journal:  PLoS Comput Biol       Date:  2020-07-01       Impact factor: 4.475

7.  In situ observation of conformational dynamics and protein ligand-substrate interactions in outer-membrane proteins with DEER/PELDOR spectroscopy.

Authors:  Benesh Joseph; Eva A Jaumann; Arthur Sikora; Katja Barth; Thomas F Prisner; David S Cafiso
Journal:  Nat Protoc       Date:  2019-07-05       Impact factor: 13.491

8.  Intracellular Protein-Lipid Interactions Studied by Rapid-Scan Electron Paramagnetic Resonance Spectroscopy.

Authors:  Theresa S Braun; Juliane Stehle; Sylwia Kacprzak; Patrick Carl; Peter Höfer; Vinod Subramaniam; Malte Drescher
Journal:  J Phys Chem Lett       Date:  2021-03-05       Impact factor: 6.475

9.  In situ EPR spectroscopy of a bacterial membrane transporter using an expanded genetic code.

Authors:  Anandi Kugele; Sophie Ketter; Bjarne Silkenath; Valentin Wittmann; Benesh Joseph; Malte Drescher
Journal:  Chem Commun (Camb)       Date:  2021-12-03       Impact factor: 6.222

  9 in total

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