Literature DB >> 27801425

Overview of the RNA G-quadruplex structures.

Magdalena Malgowska1, Karolina Czajczynska1, Dorota Gudanis1, Aleksander Tworak1, Zofia Gdaniec1.   

Abstract

G-quadruplexes are non-canonical secondary structures which may be formed by guanine rich sequences, both in vitro and in living cells. The number of biological functions assigned to these structural motifs has grown rapidly since the discovery of their involvement in the telomere maintenance. Knowledge of the G-quadruplexes' three-dimensional structures plays an important role in understanding of their conformational diversity, physiological functions, and in the design of novel drugs targeting the G-quadruplexes. In the last decades, structural studies have been mainly focused on the DNA G-quadruplexes. Their RNA counterparts gained an increased interest along with a still-emerging recognition of the central role of RNA in multiple cellular processes. In this review we focus on structural properties of the RNA G-quadruplexes, based on high-resolution structures available in the RCSB PDB data base and on structural models. In addition, we point out the current challenges in this field of research.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27801425     DOI: 10.18388/abp.2016_1335

Source DB:  PubMed          Journal:  Acta Biochim Pol        ISSN: 0001-527X            Impact factor:   2.149


  20 in total

1.  Investigation of higher-order RNA G-quadruplex structures in vitro and in living cells by 19F NMR spectroscopy.

Authors:  Hong-Liang Bao; Yan Xu
Journal:  Nat Protoc       Date:  2018-03-08       Impact factor: 13.491

2.  Structural and Dynamical Characterization of DNA and RNA Quadruplexes Obtained from the GGGGCC and GGGCCT Hexanucleotide Repeats Associated with C9FTD/ALS and SCA36 Diseases.

Authors:  Yuan Zhang; Christopher Roland; Celeste Sagui
Journal:  ACS Chem Neurosci       Date:  2018-01-12       Impact factor: 4.418

Review 3.  Action and function of helicases on RNA G-quadruplexes.

Authors:  Marco Caterino; Katrin Paeschke
Journal:  Methods       Date:  2021-09-10       Impact factor: 4.647

Review 4.  Modulation of DNA structure formation using small molecules.

Authors:  Imee M A Del Mundo; Karen M Vasquez; Guliang Wang
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2019-09-03       Impact factor: 4.739

Review 5.  RNA G-Quadruplexes in Biology: Principles and Molecular Mechanisms.

Authors:  Marta M Fay; Shawn M Lyons; Pavel Ivanov
Journal:  J Mol Biol       Date:  2017-05-26       Impact factor: 5.469

6.  Motif independent identification of potential RNA G-quadruplexes by G4RNA screener.

Authors:  Jean-Michel Garant; Jean-Pierre Perreault; Michelle S Scott
Journal:  Bioinformatics       Date:  2017-11-15       Impact factor: 6.937

7.  Identification of functional tetramolecular RNA G-quadruplexes derived from transfer RNAs.

Authors:  Shawn M Lyons; Dorota Gudanis; Steven M Coyne; Zofia Gdaniec; Pavel Ivanov
Journal:  Nat Commun       Date:  2017-10-24       Impact factor: 14.919

8.  SARS-CoV-2 Nsp3 unique domain SUD interacts with guanine quadruplexes and G4-ligands inhibit this interaction.

Authors:  Marc Lavigne; Olivier Helynck; Pascal Rigolet; Rofia Boudria-Souilah; Mireille Nowakowski; Bruno Baron; Sébastien Brülé; Sylviane Hoos; Bertrand Raynal; Lionel Guittat; Claire Beauvineau; Stéphane Petres; Anton Granzhan; Jean Guillon; Geneviève Pratviel; Marie-Paule Teulade-Fichou; Patrick England; Jean-Louis Mergny; Hélène Munier-Lehmann
Journal:  Nucleic Acids Res       Date:  2021-07-21       Impact factor: 16.971

9.  Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.

Authors:  Marko Trajkovski; Tamaki Endoh; Hisae Tateishi-Karimata; Tatsuya Ohyama; Shigenori Tanaka; Janez Plavec; Naoki Sugimoto
Journal:  Nucleic Acids Res       Date:  2018-05-04       Impact factor: 16.971

10.  Structural dynamics of propeller loop: towards folding of RNA G-quadruplex.

Authors:  Marek Havrila; Petr Stadlbauer; Petra Kührová; Pavel Banáš; Jean-Louis Mergny; Michal Otyepka; Jirí Šponer
Journal:  Nucleic Acids Res       Date:  2018-09-28       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.