Literature DB >> 27796935

Siphonobacter intestinalis sp. nov., a bacterium isolated from the feces of Pseudorhynchus japonicus.

Shin Ae Lee1, Jeong Myeong Kim1, Jae-Hyung Ahn1, Jae-Ho Joa2, Soo-Jin Kim1, Mee-Kyung Sang1, Jaekyeong Song1, Soon-Wo Kwon1, Hang-Yeon Weon3.   

Abstract

Strain 63MJ-2T was isolated from the feces of broad-winged katydid (Pseudorhynchus japonicus) collected in Korea. The 16S rRNA gene sequence of this strain showed the highest sequence similarity with that of Siphonobacter aquaeclarae P2T (96.1%) and had low similarities (below 86.3%) with those of other members of family 'Flexibacteraceae'. The strain 63MJ-2T is a strictly aerobic, Gram-stain-negative, non-motile, rod-shaped bacterium. The strain grew at 4-35°C (optimum, 25-30°C), pH of 5.0-9.0 (optimum, 6.0-7.0), and 0-2.0% (optimum, 1.0-2.0) (w/v) NaCl. The DNA G+C content of strain 63MJ-2T was 43.5 mol%. The major fatty acids were C16:1 ω5c (42.5%), iso-C17:0 3-OH (18.7%), and summed feature 3 (iso-C15:0 2-OH and/or C16:1 ω7c, 18.0%). The major menaquinone was MK-7 and polar lipids were phosphatidylethanolamine, six unknown aminolipids, and five unknown lipids. Based on the evidence from our polyphasic taxonomic study, we conclude that strain 63MJ-2T should be classified as a novel species of the genus Siphonobacter, and propose the name Siphonobacter intestinalis sp. nov. The type strain is 63MJ-2T (=KACC 18663T =NBRC 111883T).

Entities:  

Keywords:  Siphonobacter; novel species; polyphasic taxonomy; strain 63MJ-2

Mesh:

Substances:

Year:  2016        PMID: 27796935     DOI: 10.1007/s12275-016-6451-7

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  9 in total

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4.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

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5.  Siphonobacter aquaeclarae gen. nov., sp. nov., a novel member of the family 'Flexibacteraceae', phylum Bacteroidetes.

Authors:  András Táncsics; Zsuzsa Kéki; Károly Márialigeti; Peter Schumann; Erika M Tóth
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8.  Fatty acid, isoprenoid quinone and polar lipid composition in the classification of Curtobacterium and related taxa.

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