Literature DB >> 27789157

The Evolution of HD2 Proteins in Green Plants.

S Bourque1, S Jeandroz2, V Grandperret2, N Lehotai2, S Aimé2, D E Soltis3, N W Miles4, M Melkonian5, M K Deyholos6, J H Leebens-Mack7, M W Chase8, C J Rothfels9, D W Stevenson10, S W Graham11, X Wang12, S Wu12, J C Pires13, P P Edger14, Z Yan15, Y Xie15, E J Carpenter16, G K S Wong17, D Wendehenne2, V Nicolas-Francès2.   

Abstract

In eukaryotes, protein deacetylation is carried out by two well-conserved histone deacetylase (HDAC) families: RPD3/HDA1 and SIR2. Intriguingly, model plants such as Arabidopsis express an additional plant-specific HDAC family, termed type-2 HDACs (HD2s). Transcriptomic analyses from more than 1300 green plants generated by the 1000 plants (1KP) consortium showed that HD2s appeared early in green plant evolution, the first members being detected in several streptophyte green alga. The HD2 family has expanded via several rounds of successive duplication; members are expressed in all major green plant clades. Interestingly, angiosperm species express new HD2 genes devoid of a zinc-finger domain, one of the main structural features of HD2s. These variants may have been associated with the origin and/or the biology of the ovule/seed. Copyright Â
© 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  1KP project; HD2; type-2 histone deacetylases; zinc finger

Mesh:

Substances:

Year:  2016        PMID: 27789157     DOI: 10.1016/j.tplants.2016.10.001

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  15 in total

Review 1.  Structure-function relationship of H2A-H2B specific plant histone chaperones.

Authors:  Ashish Kumar; Dileep Vasudevan
Journal:  Cell Stress Chaperones       Date:  2019-11-09       Impact factor: 3.667

2.  Genome-wide identification of chromatin regulators in Sorghum bicolor.

Authors:  Yongfeng Hu; Xiaoliang Chen; Chao Zhou; Zhengquan He; Xiangling Shen
Journal:  3 Biotech       Date:  2022-04-22       Impact factor: 2.406

3.  Genome-Wide Analysis of the HDAC Gene Family and Its Functional Characterization at Low Temperatures in Tartary Buckwheat (Fagopyrum tataricum).

Authors:  Yukang Hou; Qi Lu; Jianxun Su; Xing Jin; Changfu Jia; Lizhe An; Yongke Tian; Yuan Song
Journal:  Int J Mol Sci       Date:  2022-07-10       Impact factor: 6.208

4.  HDAC4 promotes the growth and metastasis of gastric cancer via autophagic degradation of MEKK3.

Authors:  Wei-Jie Zang; Yi-Lin Hu; Chen-Yu Qian; Ying Feng; Jia-Zhou Liu; Jun-Ling Yang; Hua Huang; Yi-Zhun Zhu; Wan-Jiang Xue
Journal:  Br J Cancer       Date:  2022-05-30       Impact factor: 9.075

Review 5.  HD2-type histone deacetylases: unique regulators of plant development and stress responses.

Authors:  Muhammad Sufyan Tahir; Lining Tian
Journal:  Plant Cell Rep       Date:  2021-05-26       Impact factor: 4.570

6.  Canonical and Noncanonical Actions of Arabidopsis Histone Deacetylases in Ribosomal RNA Processing.

Authors:  Xiangsong Chen; Li Lu; Shuiming Qian; Mark Scalf; Lloyd M Smith; Xuehua Zhong
Journal:  Plant Cell       Date:  2018-01-17       Impact factor: 11.277

Review 7.  Involvement of histone acetylation and deacetylation in regulating auxin responses and associated phenotypic changes in plants.

Authors:  Abdul Wakeel; Imran Ali; Ali Raza Khan; Minjie Wu; Sakila Upreti; Dongdong Liu; Bohan Liu; Yinbo Gan
Journal:  Plant Cell Rep       Date:  2017-09-25       Impact factor: 4.570

Review 8.  Perspectives for epigenetic editing in crops.

Authors:  S Selma; D Orzáez
Journal:  Transgenic Res       Date:  2021-04-23       Impact factor: 2.788

Review 9.  Structural and chemical biology of deacetylases for carbohydrates, proteins, small molecules and histones.

Authors:  Marco Bürger; Joanne Chory
Journal:  Commun Biol       Date:  2018-12-05

10.  Genome-scale analysis of regulatory protein acetylation enzymes from photosynthetic eukaryotes.

Authors:  R Glen Uhrig; Pascal Schläpfer; Devang Mehta; Matthias Hirsch-Hoffmann; Wilhelm Gruissem
Journal:  BMC Genomics       Date:  2017-07-05       Impact factor: 3.969

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