Literature DB >> 27783956

Highly Efficient Genome Editing of Murine and Human Hematopoietic Progenitor Cells by CRISPR/Cas9.

Michael C Gundry1, Lorenzo Brunetti2, Angelique Lin3, Allison E Mayle1, Ayumi Kitano4, Dimitrios Wagner5, Joanne I Hsu6, Kevin A Hoegenauer4, Cliona M Rooney7, Margaret A Goodell8, Daisuke Nakada9.   

Abstract

Our understanding of the mechanisms that regulate hematopoietic stem/progenitor cells (HSPCs) has been advanced by the ability to genetically manipulate mice; however, germline modification is time consuming and expensive. Here, we describe fast, efficient, and cost-effective methods to directly modify the genomes of mouse and human HSPCs using the CRISPR/Cas9 system. Using plasmid and virus-free delivery of guide RNAs alone into Cas9-expressing HSPCs or Cas9-guide RNA ribonucleoprotein (RNP) complexes into wild-type cells, we have achieved extremely efficient gene disruption in primary HSPCs from mouse (>60%) and human (∼75%). These techniques enabled rapid evaluation of the functional effects of gene loss of Eed, Suz12, and DNMT3A. We also achieved homology-directed repair in primary human HSPCs (>20%). These methods will significantly expand applications for CRISPR/Cas9 technologies for studying normal and malignant hematopoiesis.
Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CRISPR/Cas9; HSC; gene therapy; genome editing; hematopoietic stem cells; homology-directed repair; human CD34; progenitor; sgRNA; transplantation

Mesh:

Substances:

Year:  2016        PMID: 27783956      PMCID: PMC5087995          DOI: 10.1016/j.celrep.2016.09.092

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  31 in total

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Authors:  B C Schaefer; M L Schaefer; J W Kappler; P Marrack; R M Kedl
Journal:  Cell Immunol       Date:  2001-12-15       Impact factor: 4.868

2.  An RNAi screen identifies Msi2 and Prox1 as having opposite roles in the regulation of hematopoietic stem cell activity.

Authors:  Kristin J Hope; Sonia Cellot; Stephen B Ting; Tara MacRae; Nadine Mayotte; Norman N Iscove; Guy Sauvageau
Journal:  Cell Stem Cell       Date:  2010-07-02       Impact factor: 24.633

Review 3.  Expanding the Biologist's Toolkit with CRISPR-Cas9.

Authors:  Samuel H Sternberg; Jennifer A Doudna
Journal:  Mol Cell       Date:  2015-05-21       Impact factor: 17.970

4.  Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells.

Authors:  Ayal Hendel; Rasmus O Bak; Joseph T Clark; Andrew B Kennedy; Daniel E Ryan; Subhadeep Roy; Israel Steinfeld; Benjamin D Lunstad; Robert J Kaiser; Alec B Wilkens; Rosa Bacchetta; Anya Tsalenko; Douglas Dellinger; Laurakay Bruhn; Matthew H Porteus
Journal:  Nat Biotechnol       Date:  2015-06-29       Impact factor: 54.908

Review 5.  The role of mutations in epigenetic regulators in myeloid malignancies.

Authors:  Alan H Shih; Omar Abdel-Wahab; Jay P Patel; Ross L Levine
Journal:  Nat Rev Cancer       Date:  2012-08-17       Impact factor: 60.716

6.  Correction of the sickle cell disease mutation in human hematopoietic stem/progenitor cells.

Authors:  Megan D Hoban; Gregory J Cost; Matthew C Mendel; Zulema Romero; Michael L Kaufman; Alok V Joglekar; Michelle Ho; Dianne Lumaquin; David Gray; Georgia R Lill; Aaron R Cooper; Fabrizia Urbinati; Shantha Senadheera; Allen Zhu; Pei-Qi Liu; David E Paschon; Lei Zhang; Edward J Rebar; Andrew Wilber; Xiaoyan Wang; Philip D Gregory; Michael C Holmes; Andreas Reik; Roger P Hollis; Donald B Kohn
Journal:  Blood       Date:  2015-03-02       Impact factor: 22.113

7.  Comparison of human cord blood engraftment between immunocompromised mouse strains.

Authors:  Sean P McDermott; Kolja Eppert; Eric R Lechman; Monica Doedens; John E Dick
Journal:  Blood       Date:  2010-04-19       Impact factor: 22.113

8.  Generation of mouse models of myeloid malignancy with combinatorial genetic lesions using CRISPR-Cas9 genome editing.

Authors:  Dirk Heckl; Monika S Kowalczyk; David Yudovich; Roger Belizaire; Rishi V Puram; Marie E McConkey; Anne Thielke; Jon C Aster; Aviv Regev; Benjamin L Ebert
Journal:  Nat Biotechnol       Date:  2014-06-22       Impact factor: 54.908

9.  Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.

Authors:  Baohui Chen; Luke A Gilbert; Beth A Cimini; Joerg Schnitzbauer; Wei Zhang; Gene-Wei Li; Jason Park; Elizabeth H Blackburn; Jonathan S Weissman; Lei S Qi; Bo Huang
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

10.  Easy quantitative assessment of genome editing by sequence trace decomposition.

Authors:  Eva K Brinkman; Tao Chen; Mario Amendola; Bas van Steensel
Journal:  Nucleic Acids Res       Date:  2014-10-09       Impact factor: 16.971

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  112 in total

1.  Large-scale GMP-compliant CRISPR-Cas9-mediated deletion of the glucocorticoid receptor in multivirus-specific T cells.

Authors:  Rafet Basar; May Daher; Nadima Uprety; Elif Gokdemir; Abdullah Alsuliman; Emily Ensley; Gonca Ozcan; Mayela Mendt; Mayra Hernandez Sanabria; Lucila Nassif Kerbauy; Ana Karen Nunez Cortes; Li Li; Pinaki P Banerjee; Luis Muniz-Feliciano; Sunil Acharya; Natalie W Fowlkes; Junjun Lu; Sufang Li; Stephan Mielke; Mecit Kaplan; Vandana Nandivada; Mustafa Bdaiwi; Alexander D Kontoyiannis; Ye Li; Enli Liu; Sonny Ang; David Marin; Lorenzo Brunetti; Michael C Gundry; Rolf Turk; Mollie S Schubert; Garrett R Rettig; Matthew S McNeill; Gavin Kurgan; Mark A Behlke; Richard Champlin; Elizabeth J Shpall; Katayoun Rezvani
Journal:  Blood Adv       Date:  2020-07-28

2.  CD7 CAR T Cells for the Therapy of Acute Myeloid Leukemia.

Authors:  Diogo Gomes-Silva; Erden Atilla; Pinar Ataca Atilla; Feiyan Mo; Haruko Tashiro; Madhuwanti Srinivasan; Premal Lulla; Rayne H Rouce; Joaquim M S Cabral; Carlos A Ramos; Malcolm K Brenner; Maksim Mamonkin
Journal:  Mol Ther       Date:  2018-10-04       Impact factor: 11.454

3.  Fluorescent labeling of CRISPR/Cas9 RNP for gene knockout in HSPCs and iPSCs reveals an essential role for GADD45b in stress response.

Authors:  Masoud Nasri; Perihan Mir; Benjamin Dannenmann; Diana Amend; Tessa Skroblyn; Yun Xu; Klaus Schulze-Osthoff; Maksim Klimiankou; Karl Welte; Julia Skokowa
Journal:  Blood Adv       Date:  2019-01-08

4.  MLL leukemia induction by t(9;11) chromosomal translocation in human hematopoietic stem cells using genome editing.

Authors:  Corina Schneidawind; Johan Jeong; Dominik Schneidawind; In-Suk Kim; Jesús Duque-Afonso; Stephen Hon Kit Wong; Masayuki Iwasaki; Erin H Breese; James L Zehnder; Matthew Porteus; Michael L Cleary
Journal:  Blood Adv       Date:  2018-04-24

5.  Human T cell development notched up a level.

Authors:  Anne-Catherine Dolens; Tom Taghon
Journal:  Nat Methods       Date:  2017-04-27       Impact factor: 28.547

6.  Chronic Infection Depletes Hematopoietic Stem Cells through Stress-Induced Terminal Differentiation.

Authors:  Katie A Matatall; Mira Jeong; Siyi Chen; Deqiang Sun; Fengju Chen; Qianxing Mo; Marek Kimmel; Katherine Y King
Journal:  Cell Rep       Date:  2016-12-06       Impact factor: 9.423

7.  CRISPR-delivery particles targeting nuclear receptor-interacting protein 1 (Nrip1) in adipose cells to enhance energy expenditure.

Authors:  Yuefei Shen; Jessica L Cohen; Sarah M Nicoloro; Mark Kelly; Batuhan Yenilmez; Felipe Henriques; Emmanouela Tsagkaraki; Yvonne J K Edwards; Xiaodi Hu; Randall H Friedline; Jason K Kim; Michael P Czech
Journal:  J Biol Chem       Date:  2018-09-06       Impact factor: 5.157

8.  Highly efficient genome editing of human hematopoietic stem cells via a nano-silicon-blade delivery approach.

Authors:  Yuan Ma; Xin Han; Oscar Quintana Bustamante; Ricardo Bessa de Castro; Kai Zhang; Pengchao Zhang; Ying Li; Zongbin Liu; Xuewu Liu; Mauro Ferrari; Zhongbo Hu; José Carlos Segovia; Lidong Qin
Journal:  Integr Biol (Camb)       Date:  2017-06-19       Impact factor: 2.192

9.  Clonal expansion and myeloid leukemia progression modeled by multiplex gene editing of murine hematopoietic progenitor cells.

Authors:  Xiangguo Shi; Ayumi Kitano; Yajian Jiang; Victor Luu; Kevin A Hoegenauer; Daisuke Nakada
Journal:  Exp Hematol       Date:  2018-05-08       Impact factor: 3.084

10.  CRISPR/Cas9 genome editing in human hematopoietic stem cells.

Authors:  Rasmus O Bak; Daniel P Dever; Matthew H Porteus
Journal:  Nat Protoc       Date:  2018-01-25       Impact factor: 13.491

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