Literature DB >> 27783480

Description of Hydration Water in Protein (Green Fluorescent Protein) Solution.

Stefania Perticaroli1,2, Georg Ehlers1,2, Christopher B Stanley1,2, Eugene Mamontov1,2, Hugh O'Neill1,2, Qiu Zhang1,2, Xiaolin Cheng1,2, Dean A A Myles1,2, John Katsaras1,2, Jonathan D Nickels1,2.   

Abstract

The structurally and dynamically perturbed hydration shells that surround proteins and biomolecules have a substantial influence upon their function and stability. This makes the extent and degree of water perturbation of practical interest for general biological study and industrial formulation. We present an experimental description of the dynamical perturbation of hydration water around green fluorescent protein in solution. Less than two shells (∼5.5 Å) were perturbed, with dynamics a factor of 2-10 times slower than bulk water, depending on their distance from the protein surface and the probe length of the measurement. This dependence on probe length demonstrates that hydration water undergoes subdiffusive motions (τ ∝ q-2.5 for the first hydration shell, τ ∝ q-2.3 for perturbed water in the second shell), an important difference with neat water, which demonstrates diffusive behavior (τ ∝ q-2). These results help clarify the seemingly conflicting range of values reported for hydration water retardation as a logical consequence of the different length scales probed by the analytical techniques used.

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Year:  2016        PMID: 27783480     DOI: 10.1021/jacs.6b08845

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

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2.  Protein Solvent Shell Structure Provides Rapid Analysis of Hydration Dynamics.

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3.  Nanosecond structural dynamics of intrinsically disordered β-casein micelles by neutron spectroscopy.

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Journal:  Biophys J       Date:  2021-10-28       Impact factor: 4.033

4.  Dynamics of water bound to crystalline cellulose.

Authors:  Hugh O'Neill; Sai Venkatesh Pingali; Loukas Petridis; Junhong He; Eugene Mamontov; Liang Hong; Volker Urban; Barbara Evans; Paul Langan; Jeremy C Smith; Brian H Davison
Journal:  Sci Rep       Date:  2017-09-19       Impact factor: 4.379

5.  In Silico Studies of Small Molecule Interactions with Enzymes Reveal Aspects of Catalytic Function.

Authors:  Rajni Verma; Katie Mitchell-Koch
Journal:  Catalysts       Date:  2017-07-14       Impact factor: 4.146

6.  Protein Backbone and Average Particle Dynamics in Reconstituted Discoidal and Spherical HDL Probed by Hydrogen Deuterium Exchange and Elastic Incoherent Neutron Scattering.

Authors:  Valentin Gogonea; Judith Peters; Gary S Gerstenecker; Celalettin Topbas; Liming Hou; Jérôme Combet; Joseph A DiDonato; Jonathan D Smith; Kerry-Anne Rye; Stanley L Hazen
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7.  The molecular dynamics of bacterial spore and the role of calcium dipicolinate in core properties at the sub-nanosecond time-scale.

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Journal:  Sci Rep       Date:  2020-05-19       Impact factor: 4.379

8.  Universal dynamical onset in water at distinct material interfaces.

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Journal:  Chem Sci       Date:  2022-03-28       Impact factor: 9.825

9.  The Structural and Dynamical Properties of the Hydration of SNase Based on a Molecular Dynamics Simulation.

Authors:  Hangxin Liu; Shuqing Xiang; Haomiao Zhu; Li Li
Journal:  Molecules       Date:  2021-09-05       Impact factor: 4.411

10.  Self-Diffusive Properties of the Intrinsically Disordered Protein Histatin 5 and the Impact of Crowding Thereon: A Combined Neutron Spectroscopy and Molecular Dynamics Simulation Study.

Authors:  Eric Fagerberg; Samuel Lenton; Tommy Nylander; Tilo Seydel; Marie Skepö
Journal:  J Phys Chem B       Date:  2022-01-19       Impact factor: 2.991

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