Literature DB >> 27781569

The complete mitochondrial genome of great cormorant, Phalacrocorax carbo (Phalacrocorax, Phalacrocoracidae).

Letong Zhang1,2,3, Ming Zhang3, Shiyang He1,2.   

Abstract

The great cormorant (Phalacrocorax carbo) is widely distributed in the world. Here, we report the complete mitogenome sequence of P. carbo, which was 18,995 bp long and composed of 15 protein-coding genes, 25 tRNA genes, 2 rRNA genes and 2 control regions. Most genes were located on H-strand except for 10 tRNAs and 2 ND6 genes. In protein-coding genes, ATG, ATC and GTG were used as initiation codons, and TAA, AGA, AGG and TAG were used as stop codons. The 25 tRNA genes ranged in size from 67 to 75 bp. And 12S and 16S rRNA were respectively 983 and 1517 bp. Except for a tRNA-Ala in P. carbo which was different from the tRNA-Lys annotated in P. chalconotus, both species of Phalacrocorax had the same order of other genes. In addition, a phylogenetic analysis may help us understand the evolutionary status of this widespread species better.

Entities:  

Keywords:  Mitogenome; Phalacrocoracidae; Phalacrocorax; Phalacrocorax carbo

Mesh:

Substances:

Year:  2016        PMID: 27781569     DOI: 10.3109/19401736.2015.1053063

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

1.  New view on the organization and evolution of Palaeognathae mitogenomes poses the question on the ancestral gene rearrangement in Aves.

Authors:  Adam Dawid Urantówka; Aleksandra Kroczak; Paweł Mackiewicz
Journal:  BMC Genomics       Date:  2020-12-07       Impact factor: 3.969

2.  Mitogenomes of Accipitriformes and Cathartiformes Were Subjected to Ancestral and Recent Duplications Followed by Gradual Degeneration.

Authors:  Adam Dawid Urantówka; Aleksandra Kroczak; Tomasz Strzała; Grzegorz Zaniewicz; Marcin Kurkowski; Paweł Mackiewicz
Journal:  Genome Biol Evol       Date:  2021-09-01       Impact factor: 3.416

3.  Genetic variation of mitochondrial DNA in Phalacrocorax carbo in Japan.

Authors:  Yoshitsugu Ochiai; Yuko Yoshikawa; Takashi Takano; Makoto Mori; Ryo Hondo; Mariko Mochizuki; Fukiko Ueda
Journal:  J Vet Med Sci       Date:  2020-04-09       Impact factor: 1.267

  3 in total

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