Literature DB >> 27781227

On the tree-like structure of rings in dense solutions.

D Michieletto1.   

Abstract

One of the most challenging problems in polymer physics is providing a theoretical description for the behaviour of rings in dense solutions and melts. Although it is nowadays well established that the overall size of a ring in these conditions scales like that of a collapsed globule, there is compelling evidence that rings may exhibit ramified and tree-like conformations. In this work I show how to characterise these local tree-like structures by measuring the local writhing of the rings' segments and by identifying the patterns of intra-chain contacts. These quantities reveal two major topological structures: loops and terminal branches which strongly suggest that the strictly double-folded "lattice animal" picture for rings in the melt may be replaced by a more relaxed tree-like structure accommodating loops. In particular, I show that one can identify hierarchically looped structures whose degree increases linearly with the size of a ring, and that terminal branches are found to store about 30% of the whole ring mass, irrespectively of its length. Finally, I draw an analogy between rings in the melt and slip-linked chains, where contact points are enforced by mobile slip-links and for which a field-theoretic treatment can be employed to get some insight into their typical conformations. These findings are ultimately discussed in the light of recent works on the static structure of rings and on the existence of inter-ring threadings.

Entities:  

Year:  2016        PMID: 27781227     DOI: 10.1039/c6sm02168a

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  8 in total

1.  Flory theory of randomly branched polymers.

Authors:  Ralf Everaers; Alexander Y Grosberg; Michael Rubinstein; Angelo Rosa
Journal:  Soft Matter       Date:  2017-02-08       Impact factor: 3.679

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Authors:  Alexandros Chremos; Ferenc Horkay; Jack F Douglas
Journal:  J Chem Phys       Date:  2022-03-07       Impact factor: 3.488

3.  The Physical Behavior of Interphase Chromosomes: Polymer Theory and Coarse-Grain Computer Simulations.

Authors:  Angelo Rosa
Journal:  Methods Mol Biol       Date:  2022

4.  Topological tuning of DNA mobility in entangled solutions of supercoiled plasmids.

Authors:  Jan Smrek; Jonathan Garamella; Rae Robertson-Anderson; Davide Michieletto
Journal:  Sci Adv       Date:  2021-05-12       Impact factor: 14.136

5.  Threading of Unconcatenated Ring Polymers at High Concentrations: Double-Folded vs Time-Equilibrated Structures.

Authors:  Jan Smrek; Kurt Kremer; Angelo Rosa
Journal:  ACS Macro Lett       Date:  2019-01-22       Impact factor: 6.903

6.  Entropy-induced Separation of Binary Semiflexible Ring Polymer Mixtures in Spherical Confinement.

Authors:  Xiaolin Zhou; Fuchen Guo; Ke Li; Linli He; Linxi Zhang
Journal:  Polymers (Basel)       Date:  2019-12-02       Impact factor: 4.329

7.  Threading-Induced Dynamical Transition in Tadpole-Shaped Polymers.

Authors:  Angelo Rosa; Jan Smrek; Matthew S Turner; Davide Michieletto
Journal:  ACS Macro Lett       Date:  2020-05-05       Impact factor: 6.903

8.  Geometric Predictors of Knotted and Linked Arcs.

Authors:  Joseph L Sleiman; Robin H Burton; Michele Caraglio; Yair Augusto Gutierrez Fosado; Davide Michieletto
Journal:  ACS Polym Au       Date:  2022-07-08
  8 in total

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